Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0500 ATGGAAGGTCGCCGGAGGGTAACGCTTTACGATCAAATGGCGTCAGCCGTGGATATCCACCGGGACTCGCTTGGTGGCTCGACGCTCGACGCCGTAATGGCGAGCAGGAAGAGAGCCGCCGAGCCGAGCAGCCGCCAGCTCAGCAGCGGCCGAACCCTCATGGACATCATGCGAGAGGACGATTCCAACAAGAAGGACCGGAGATCTTGGAAACTCTTCAGAGACAAGCTCCGGCTCATGGCCGCCGGATCTGCTTGGTTCTCCGCAACCGCAATCCATATCGCAGACTCGGATATTGCTATCCCTAACCAGAATACCAGCAACTCTCGCCTGAACCCCGACGCGCCGTCTACAAGTTCCCGACCCGGTGAGATCTCCCCGCGCCGGGGATCCCCGTCTCCGGCCGGGGAGTCCAGACTTCAAATGTCGCGCTCGGCGTCCTTCCGGCGAGACGGCGGGGTCACGTTCCGGGACTACTTGGACAGCGACGACGACGGATCCGACTACGATGACTGGGATGCGGCGCGTGGGGGCACGCGCCGCCTGTCTACCATCATATCTGAGGAAAGAGCGTTGTCGGCCAGAGAAGCAGAGGCGGCTGCGGTTTCTGCTGCGGCGGCGGTGGAGCCGGCGAGGATGTCGCTGATGGACTTGCTGGAGGAGACAGATATGCATATGGGGTTTGAAGGAACGAGATACAGAGTGGGTGACGATGGAGAGTATGGGAATCAGATTCAGAAAGATGAAGAAGGAGAAGAAGTGGTGGAAGAAAATTACAGAATAGAGGAGAATTGTTGTGTGTGTATGGTGAGGCATAAAGGAGCAGCGTTCATACCGTGTGGTCACACATTTTGCAGGCAATGTTCGAGGGAGCTTTGGGTGAGCCGAGGCCATTGTCCTCTCTGCAACAATTCTATTGTAGAAATTCTTGACTTGTTCTGA 942 0.5711 MEGRRRVTLYDQMASAVDIHRDSLGGSTLDAVMASRKRAAEPSSRQLSSGRTLMDIMREDDSNKKDRRSWKLFRDKLRLMAAGSAWFSATAIHIADSDIAIPNQNTSNSRLNPDAPSTSSRPGEISPRRGSPSPAGESRLQMSRSASFRRDGGVTFRDYLDSDDDGSDYDDWDAARGGTRRLSTIISEERALSAREAEAAAVSAAAAVEPARMSLMDLLEETDMHMGFEGTRYRVGDDGEYGNQIQKDEEGEEVVEENYRIEENCCVCMVRHKGAAFIPCGHTFCRQCSRELWVSRGHCPLCNNSIVEILDLF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0500 313 CDD RING-HC 265 302 - -
Bisa10g0500 313 MobiDBLite consensus disorder prediction 102 126 - -
Bisa10g0500 313 PANTHER OS01G0917900 PROTEIN 4 313 - -
Bisa10g0500 313 MobiDBLite consensus disorder prediction 102 147 - -
Bisa10g0500 313 MobiDBLite consensus disorder prediction 38 65 - -
Bisa10g0500 313 ProSiteProfiles Zinc finger RING-type profile. 265 303 IPR001841 -
Bisa10g0500 313 Pfam Zinc finger, C3HC4 type (RING finger) 262 307 - -
Bisa10g0500 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 313 IPR013083 -
Bisa10g0500 313 SMART ring_2 265 302 IPR001841 -
Bisa10g0500 313 SUPERFAMILY RING/U-box 264 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0500 Bisa-ChrBisa10 11068605 11069546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0500 4 313 C3H Transcription Factor Family AT3G25030 37.975 4.01e-55 178