Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0488 ATGGACTTGTGGTACTCATGGCTTGCCTTCTTTCTGCTTTGTAGCTTCTGGTCTGCTATTTCCTGTGACCAAGATGGTTTCTTGAGTCTGTCTTGTGGTGGAAGAACCAGCTTCAATGATTCATCAAACATATCATGGTCCCCAGACACTACTTACATAACCACAGGAAAGATAACCACCATCACTTACAACAATGGTACCTCCTGGTCCAATGTCTCGGCCCGGTTCTTCCCGAATCCCCGGGGCCGAAAATGCTACAGGATTCCTGTGAACAATGCAACAAGTCTTGTTCTTGTTAGAGCGAAATTCGTGTACAAGAACTATGATGGACTTGGAAGACCTCCTACATTCTCTGTTTCTCTTGGGACAGCCATTGCTGCAACTATAAGTCTTGCTAAAGATGACCCTTGGACTGAAGAGTTTTTATGGACAGTCAATAAGGACACACTGCTCTTCTGTTTAGTTGCTACCCCAAGCGGTGGATGTCCGGTAATTTCGTCCCTCGAAATCCGACCGCTTCCTCAAGGAGCCTACACAAGCGGCATGGAAGATTTCTCAAATAAGTTGCTAAGGCAGAGTTATCGAATTGACTGTGGCCACACCAATGAGTCTATCCAGTACCCTTTGGATCCATATGATAGAATATGGGATGGTGACAGAAGTTTCAGGCCCTTCCATGTTGCAGCTGGGTTCAAGGTTCAGCTTAGCTTTAATGAGTCCGGTCTGATGGAAAAACCGCCGGCTGCTGTGCTTCAAACCGGGCGAGTCCTGGCGCGGCGGAAGATCCTGACGTATAGCCTCCCCCTTGATGCGTCAGGGGACTACTACATCATTCTCTATTTTGCTGGGATTCTTCCTGTTTTTCCCTCGTTTGATGTGTTCATAAATGGTGATCTTCTGAAATCAAACTTCCAAATCAAGAGTTCAGAGACTAGCGCTTTATACGTCACACGAAAGGGAATCAGCAGCCTCAATATAACACTCAGGAGTATCCACTTTTACCCTCAAATCAATGCATTTGAGGTATACCAGATGCTTGATATTCCATCTGAAGCTTCTTCAACCACAGTTTCAGCACTACAAGTTATTCAACAGTCCACTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCTCCTTCTCCATGGGATCATATTGGATGCGAAGGAAACCTTGTTACATCATTGGATATCTCCAATGTGAATTTGAGGTCTATTACTCCTACATTTGGTGACTTGTTGGACCTTAAGAAATTAGATTTGCACAACACATCGCTTGCTGGTGAAATACAGAACTTGGGTAGCTTGCAACATCTTGAGAAATTGAACCTGAGTTTTAATCAGCTAACATCCTTTGGCTCAGAGCTCGAGAACTTAGTTAGCCTTCGAATCTTAGACTTGCAGAACAATAGCCTCCAGGGATTAGTTCCTGATAGCCTGGGAGAGTTAGAAAATCTCCACTTACTGAACCTGGAAAACAATAAGCTACAAGGTCCACTACCAGAGTCTTTGAACAAAGAAACCCTAGAAATCAGAACATCTGGAAATTTGTGCCTTACTTTCTCCACAGCCATATGTGATGATGCATCATTCACTCCTTCAATTGAGACACCACAAGTTACAATAGTTCCAAGAAAGAAGAACAATGTACATAACCACCTAGCAATCATACTAGCCGTTGTTGCCGGAGTCTCACTTGTGCTTCTCATGATCTGTCTTTCGGTACTGCTACGAATGACTAAAAAGAGATATGACGTGTCTCATATTGCAAGAGAAGAACTGGATTTAAGGAACTGGGGTGCAGCAAAAGTCTTTTCCTACAAAGAAATCAAAGCAGCTACAAGAAACTTCAAAGAAGTTTTAGGAAGGGGCAGTTTTGGATCGGTTTACCTTGGAAAGCTTCCAGATGGCAAGTCAGTTGCTGTCAAAGTTCGGTTGGACAAAACCCAGCTGGGAGCTGATTCTTTCATCAATGAGGTCCACCTTTTGTCACAAATTCGACATCAAAATCTGGTGTCATTGGAAGGATTCTGTCATGAATCAAAGCATCAGATATTAGTTTATGAGTACTTAGCTGGAGGATCCCTAGAAGATCACCTCTATGGTACAAACAGCCAAAAAAGGTCCTTAAGCTGGGTTCGAAGATTGAAAATTGCAATTGATGCAGCAAAAGGATTGGACTATTTGCATAATGGAAGTGAACCACGAATCATACACCGTGATGTAAAGTGCAGTAACATCCTGTTGGACATGGAGATGAATGGCAAGGTCTGTGACTTTGGCCTCTCTAAGCAAGTCACCCAGGCAGATGCAACTCATGTGACCACTGTTGTCAAGGGCACTGCAGGCTATCTTGACCCTGAGTACTATTCCACCCAACAACTGACTGAGAAGAGTGATGTGTATAGTTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAACCATTGAGTCACTCTGGAACTCCTGATTCTTTCAATCTGGTGTTATGGGCCAAGCCTTACTTGCAGGCAGATGCATTTGAAATTGTGGATGAAAGCATAAGTGGGACTTTTGATAAAGAAAGCATGAGGAAGACAGCCTACATTGCTGTGAAGTCAGTGGAAAGAGATGCATCACTGAGGCCAACTATTGCAGAAGTGTTAGCAGAACTAAAGGAAGCCTATAATATTCAGCTCAGATTCCTTGATTCTTTTTAA 2703 0.434 MDLWYSWLAFFLLCSFWSAISCDQDGFLSLSCGGRTSFNDSSNISWSPDTTYITTGKITTITYNNGTSWSNVSARFFPNPRGRKCYRIPVNNATSLVLVRAKFVYKNYDGLGRPPTFSVSLGTAIAATISLAKDDPWTEEFLWTVNKDTLLFCLVATPSGGCPVISSLEIRPLPQGAYTSGMEDFSNKLLRQSYRIDCGHTNESIQYPLDPYDRIWDGDRSFRPFHVAAGFKVQLSFNESGLMEKPPAAVLQTGRVLARRKILTYSLPLDASGDYYIILYFAGILPVFPSFDVFINGDLLKSNFQIKSSETSALYVTRKGISSLNITLRSIHFYPQINAFEVYQMLDIPSEASSTTVSALQVIQQSTGLDLGWQDDPCSPSPWDHIGCEGNLVTSLDISNVNLRSITPTFGDLLDLKKLDLHNTSLAGEIQNLGSLQHLEKLNLSFNQLTSFGSELENLVSLRILDLQNNSLQGLVPDSLGELENLHLLNLENNKLQGPLPESLNKETLEIRTSGNLCLTFSTAICDDASFTPSIETPQVTIVPRKKNNVHNHLAIILAVVAGVSLVLLMICLSVLLRMTKKRYDVSHIAREELDLRNWGAAKVFSYKEIKAATRNFKEVLGRGSFGSVYLGKLPDGKSVAVKVRLDKTQLGADSFINEVHLLSQIRHQNLVSLEGFCHESKHQILVYEYLAGGSLEDHLYGTNSQKRSLSWVRRLKIAIDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNGKVCDFGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLSHSGTPDSFNLVLWAKPYLQADAFEIVDESISGTFDKESMRKTAYIAVKSVERDASLRPTIAEVLAELKEAYNIQLRFLDSF 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0488 900 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Bisa10g0488 900 Pfam Malectin-like domain 30 345 IPR024788 -
Bisa10g0488 900 CDD STKc_IRAK 621 888 - -
Bisa10g0488 900 PANTHER OS07G0107800 PROTEIN-RELATED 454 890 - -
Bisa10g0488 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Bisa10g0488 900 ProSiteProfiles Protein kinase domain profile. 615 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0488 900 Gene3D Transferase(Phosphotransferase) domain 1 691 895 - -
Bisa10g0488 900 Pfam Protein tyrosine and serine/threonine kinase 617 884 IPR001245 GO:0004672|GO:0006468
Bisa10g0488 900 Gene3D Phosphorylase Kinase; domain 1 587 690 - -
Bisa10g0488 900 SUPERFAMILY Protein kinase-like (PK-like) 599 886 IPR011009 -
Bisa10g0488 900 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 691 896 - -
Bisa10g0488 900 FunFam serine/threonine-protein kinase PBS1-like 585 690 - -
Bisa10g0488 900 Gene3D - 191 347 - -
Bisa10g0488 900 Gene3D Ribonuclease Inhibitor 355 527 IPR032675 -
Bisa10g0488 900 SUPERFAMILY L domain-like 358 506 - -
Bisa10g0488 900 SMART serkin_6 615 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0488 900 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Bisa10g0488 900 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Bisa10g0488 900 SMART LRR_typ_2 483 506 IPR003591 -
Bisa10g0488 900 SMART LRR_typ_2 436 458 IPR003591 -
Bisa10g0488 900 SMART LRR_typ_2 459 482 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0488 Bisa-ChrBisa10 10875748 10883113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0488 8 897 Receptor kinase-like Gene Family AT5G48740 63.820 0.0 1114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bisa10g0488 Malectin_like 3.9e-53 CL0202