Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0463 ATGTACATGAAAGAATGCTTCCATCTGATTCCAGCAGAAATTGGAAATGAATTCTTTCGCTTTGAGATCATGCTTTCTCAATTTGGCAAAGGTATAAGTACTTGGGACAATGGAAGTTCTAGAGATGAATCTTTTGCAAGTGGTTCGGGGATCTGCGCGAAGCGAGTGGTGGTGGACGCGCGCCACCATATGCTGGGTCGGCTGGCATCCATCGTGGCCAAGGAGCTCCTTAACGGTCAGAAGGTCGTCGTCGTGAGGTGCGAGGAGATTTGCATCTCCGGAGGCCTTGTCAGGCAGAAGATGAAGTACATGAGGTTCCTCCGCAAGCGCATGAACACTAAGCCTTCTCATGGTCCTATTCATTTCCGAGCCCCTAGCAAGATTTTCTGGCGTACCGTCCGTGGGATGATACCTCATAAGACAAAGCGTGGGGCTGCTGCTCTTGCACGATTGAAGGTGTTTGAGGGCATTCCTCCTCCATATGACAAGATGAAGAGAATGGTTGTTCCCGATGCTTTGAAGGTCTTGAGGCTTCAGAAAGGACACAAATACTGCTTGGTTGGTAGATTGTCATCTGAGGTTGGGTGGAACTATTATGATACCATTAGGGAACTGGAAAAGAAGAGAAAGGAGAGAGCACAATTGGCTTACGAGAGGAAGAAGCAGCTTAACAAATTAAGGGTTAAGGCTGAGAAGATTGCAGAAGAGAAGCTCGGTTCCCAGCTTAACATCCTTGCTCCGGTCAAGTACTGA 753 0.4794 MYMKECFHLIPAEIGNEFFRFEIMLSQFGKGISTWDNGSSRDESFASGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKMKRMVVPDALKVLRLQKGHKYCLVGRLSSEVGWNYYDTIRELEKKRKERAQLAYERKKQLNKLRVKAEKIAEEKLGSQLNILAPVKY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0463 250 Gene3D Ribosomal protein L13 52 198 IPR036899 GO:0003735|GO:0005840|GO:0006412
Bisa10g0463 250 Hamap 50S ribosomal protein L13 [rplM]. 55 179 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bisa10g0463 250 FunFam 60S ribosomal protein L13a 199 250 - -
Bisa10g0463 250 ProSitePatterns Ribosomal protein L13 signature. 133 156 IPR023563 GO:0003735|GO:0005840|GO:0006412
Bisa10g0463 250 NCBIfam 50S ribosomal protein L13 56 198 IPR005755 GO:0003735|GO:0006412|GO:0015934
Bisa10g0463 250 Pfam Ribosomal protein L13 54 159 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bisa10g0463 250 SUPERFAMILY Ribosomal protein L13 56 198 IPR036899 GO:0003735|GO:0005840|GO:0006412
Bisa10g0463 250 CDD Ribosomal_L13 56 157 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bisa10g0463 250 FunFam 60S ribosomal protein L13a-4 52 198 - -
Bisa10g0463 250 Gene3D - 200 250 - -
Bisa10g0463 250 PANTHER RIBOSOMAL PROTEIN L13 48 230 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0463 Bisa-ChrBisa10 9888983 9897223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0463 45 250 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 89.320 1.40e-139 388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0463 10 9888983 9897223 Bisa10g0463 10 9888983 9897223 ECH