Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0444 ATGAGTTGCCTTCCTTGTTTTTCATCGAATGAAAAGAAAGCAACACAGAAGAGAACCAAAAGGCCACAAATGCAGACATCTCATCCTCAAAAAGAAGCGTTACTTCCTCATCCACGCCCGGAAAATCAGGTTTCTAAGCCAACTGAGAATGGAACAAACAAGGATGCCAGTAAAGATATCAACAACAATAACATTGCCGCCGAAACTTTCACCTTCCGGGAACTGGCCGCCGTGACTAAAAACTTTCGACAAGAGTGCCTGATAGGTGAAGGTGGATTTGGAAGAGTTTATAAAGGGAAACTTGAGAAAACCAACCAGATTGTGGCAGTGAAGCAATTAGACAGAAATGGATTGCAAGGGAACAGAGAGTTCCTAGTGGAAGTGTTGATGTTGAGCCTCTTACACCATCACCATCTTGTCAATCTCATTGGATACTGTGCTGATGGAGATCAAAGGTTGTTGGTCTATGAATACATGCCCATGGGCTCTCTTGAAGATCATTTACTTGATCTTGAACCACATCAGAGGCCTTTGGACTGGTTTGTGAGGATGAAAATATCATTGGGAGCATCCAAAGGTTTAGAATATTTACATGATAAGGCCAAGCCTCCTGTGATCTACCGTGACATGAAAGCCTCAAACATCTTATTAGACACTGAGTTCAATGCAAAGCTCTCGGATTTTGGATTGGCCAAGCTCGGCCCCACGGGGGACAAGTCGCATGTCTCGTCCAGAGTTATGGGAACTTACGGATACTGTGCCCCTGAGTATCAGAGGACTGGTCAGCTCACTGTAAAGTCAGATATCTATAGTTTTGGAGTTGTTTTGCTCGAAATTATCACTGGAAAGCGAGTCATCGACAACACAAGACCTACTCGGCAACAAAATCTAGTGGCTTGGGCACAACCAATATTCAAGGATCCTAATAGATACCATGAGCTTGCCGATCCCCTTCTTCACAGAAACTTCCCAGTGAGAGCCTTCAACCAAGCCGTGGCCGTCGCTGCCATGTGCCTCAACGACGAACCGGCTGCCCGGCCGATGATCTGCGACGTCGTCACCGCCCTAACTTTCCTCGGCAACCCTTCCAGCGATACTGCTTCCGACGACAAGCCCTCACAGTTGCCGACGTCGCCACCATCGGAGCAACAAACCCAGGGCCAGGGGAGTTCAAATCTGAATATTCTGGATAATAACAACGTTAATGTCGATCGCGAACGAGCCGTCGCTGAAGCCATACAGTGGGGGTCAGCTTCTCGGACGAATGCTGCTGCAAGAGCAACTACGCCTGCGCCTGCAAAAGCTTCCTCTTAA 1314 0.4749 MSCLPCFSSNEKKATQKRTKRPQMQTSHPQKEALLPHPRPENQVSKPTENGTNKDASKDINNNNIAAETFTFRELAAVTKNFRQECLIGEGGFGRVYKGKLEKTNQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHHHLVNLIGYCADGDQRLLVYEYMPMGSLEDHLLDLEPHQRPLDWFVRMKISLGASKGLEYLHDKAKPPVIYRDMKASNILLDTEFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLEIITGKRVIDNTRPTRQQNLVAWAQPIFKDPNRYHELADPLLHRNFPVRAFNQAVAVAAMCLNDEPAARPMICDVVTALTFLGNPSSDTASDDKPSQLPTSPPSEQQTQGQGSSNLNILDNNNVNVDRERAVAEAIQWGSASRTNAAARATTPAPAKASS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0444 437 FunFam Serine/threonine-protein kinase PBS1 54 158 - -
Bisa10g0444 437 Pfam Protein kinase domain 84 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0444 437 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
Bisa10g0444 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Bisa10g0444 437 MobiDBLite consensus disorder prediction 416 437 - -
Bisa10g0444 437 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0444 437 MobiDBLite consensus disorder prediction 43 60 - -
Bisa10g0444 437 MobiDBLite consensus disorder prediction 363 400 - -
Bisa10g0444 437 FunFam Serine/threonine-protein kinase PBS1 159 374 - -
Bisa10g0444 437 PANTHER OS07G0668900 PROTEIN 6 368 - -
Bisa10g0444 437 Gene3D Transferase(Phosphotransferase) domain 1 159 374 - -
Bisa10g0444 437 SUPERFAMILY Protein kinase-like (PK-like) 68 379 IPR011009 -
Bisa10g0444 437 SMART serkin_6 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0444 437 Gene3D Phosphorylase Kinase; domain 1 52 158 - -
Bisa10g0444 437 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0444 Bisa-ChrBisa10 9624705 9629664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0444 1 423 Glycoside Hydrolase AT3G07070 63.805 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bisa10g0444 Pkinase 3.9e-47 CL0016