Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0412 ATGGTGCTAATACAAGAGGCTGAGGAGAAGGAACAAAATGTAAATCCTCCTGAAACTGCAACTGCAAAATCATCGATCACCACCAATGCCCGTGCCGACGGCCTTGAAACCGCCAGTGGCGCTGATCACGGTGCAGCTGGCGATGGTGAAGGGGAGGCGCGTAAAGAACAGCCTCCACAAGGTAGCATACAAGAGCAAGGGCAGGGCATTCCTCGGAGAAATGAATCTTCCCAAGGTGCTTCAGAAAAAGAGGAAATAGGACAGAAAGCGTTAGCTCAAGCTAATGAAGCAAAACTTGAAGGGAATAAACTGTTTGGAGACGAGCAATATGAGGAGGCACTATCACGATATGAATTTGCTTTACAAGTTGCATCCGACGTGCCTTCGTCTGTGGAGATACGTTCAATATGTCATGCAAACCGTGCCGTATGCTTTATGAAACTGGGTAAATATGAGAGCACAATTAAAGAATGCACAAAAGCGTTAGAACTCAACCCTGTGTATGTTAAAGCTCTGATAAGAAGAGGAGAGGCTCATGAAAAGCTAGAAAATTTTGAACAGGCCATTGCTGATATGAAAAAGATTTTAGAAATTGACCCCTCAAATGATCAAGCTAGGAAAAAAATTTGCCGACTGGAGCCACTGGCTGCAGAAAAGATGGAAAAAATGAAGGAAGAAATGATTGCAAAACTGAAGGAGGTGGGGAATTCTTTATTGGGCCGCTTTGGGATGAGTATTGACAACTTCAAAGCTGTTAAAGACCCGGAAACTGGCTCCTATTCTGTGTCATTCCAAAACTAA 801 0.4395 MVLIQEAEEKEQNVNPPETATAKSSITTNARADGLETASGADHGAAGDGEGEARKEQPPQGSIQEQGQGIPRRNESSQGASEKEEIGQKALAQANEAKLEGNKLFGDEQYEEALSRYEFALQVASDVPSSVEIRSICHANRAVCFMKLGKYESTIKECTKALELNPVYVKALIRRGEAHEKLENFEQAIADMKKILEIDPSNDQARKKICRLEPLAAEKMEKMKEEMIAKLKEVGNSLLGRFGMSIDNFKAVKDPETGSYSVSFQN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0412 266 Gene3D Tetratricopeptide repeat domain 60 234 IPR011990 GO:0005515
Bisa10g0412 266 SMART tpr_5 94 127 IPR019734 GO:0005515
Bisa10g0412 266 SMART tpr_5 169 202 IPR019734 GO:0005515
Bisa10g0412 266 SMART tpr_5 135 168 IPR019734 GO:0005515
Bisa10g0412 266 MobiDBLite consensus disorder prediction 14 34 - -
Bisa10g0412 266 ProSiteProfiles TPR repeat region circular profile. 169 202 - -
Bisa10g0412 266 Coils Coil 217 237 - -
Bisa10g0412 266 ProSiteProfiles TPR repeat profile. 169 202 IPR019734 GO:0005515
Bisa10g0412 266 Pfam Tetratricopeptide repeat 137 166 IPR001440 GO:0005515
Bisa10g0412 266 Pfam Tetratricopeptide repeat 169 202 IPR001440 GO:0005515
Bisa10g0412 266 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 25 266 - -
Bisa10g0412 266 MobiDBLite consensus disorder prediction 1 88 - -
Bisa10g0412 266 MobiDBLite consensus disorder prediction 59 76 - -
Bisa10g0412 266 SUPERFAMILY TPR-like 93 212 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0412 Bisa-ChrBisa10 8971248 8981312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0412 94 225 Calmodulin-binding Proteins AT3G25230 38.571 1.10e-15 74.7