Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0410 ATGGCGGTCACGAAGCTTTTCTCTCTCTACATTTTCATATCCTTCTTCTTTCTCTGCCACACTCAGTCTCACTCTTCGTCTTCTTCCTCTGACATTGATCTTCTCTTGGGAAAAATCAGAGCATCCCCACAGGGTAACACAAAGAACATCGTTTTGTCTTTCTGGAACACCTCTGTACCTCTTTGCCAATGGAGAGGCCTCAAATGGGTCTTCTCCAATGGCTCTTCTCTCTCCTGCACCGATTTCTCCTCACCCCAATGGACTAATCTTTCACTGTACAAAGACCCTTCGCTTCATTTGCTCTCTCTTCGACTTCCTTCGGCCAATCTCTCTGGTTCACTCCCTAAGGAGGTTTCAGAGTTCCCTATGCTTCAGAGCCTTTATCTCGACATCAATTCGTTAAAAGGAGCAATCCCTCTTGAACTTGGTTATATGTCCTCCCTCTCCGAAATCGACTTGGGTGAAAATTTTCTCACTGGAGCTTTACCCCCATCGATTTGGAATTTGTGTGATAGGCTTGTTTCTCTTAGACTCCATGGTAATCTGCTTTCCGGGTCTGTTCCAAAGCCGGCATTGCCAAATTGCTCGTGTGAGAATTTGCGGTTTCTTGATTTGGGTAAGAACAATTTTTCTGGATATTTCCCAGAGTTCATCACCCATTTTGTTGGTTTGAAACAGCTTGACTTGGGGGATAACATGTTTGAAGGTTCAGTTCCTCAGAGCTTAGGAGGGGTAAGGCTTGAGAAATTGAACCTTTCCCACAATAATTTTAGTGGGGTTTTGCCTACTTTTCAGGAATCAAAATTTGGTCTGGAGGTTTTTGAAAAGAATAACCCAGACTTGTGTGGGCCACCTTTGAGGAGTTGTAGTGGAAATTCTAAAGCTGGACTGAGTTCTGGTGCAATTGCTGCTGTAGTCATAAGTTTGCTGGCTGGAAGTGTGGTTCTATCTTCTTTGTTAATTGGATATATGGAAATGAAGAAACGGAAGAAGGGTAGGGGAGAGAGTGATGATGAATTCGAGGAAGAAGAAGAAGATGAAGAGAATGGGAATAGTAATAATAATTGTGGGGGTGCAGATGGTGAGGGTAAGCTTATGTTGTTCCAAGGTGGCGAGAATTTGAAGTTAGATGATGTGCTGAATGCAGCCGGGCATGTTATGGAGAAGACATTGTATTCTGTATTTCCGGCAAAGCTTGCTGATGGAGGAGGCACTATTGCTTTGAGGTTGTTGATAGAAGATTGTTCCAAGGACAGGGCTTCAAGCTTGCCTGTTATAAAGCAATGGGGGAAAATTCGTCATGAGAATTTGATTCCATTGAGAGCTTTCTATCAGGGAAAGCGAGGGGAGAAGCTCCTTATTTATGACTATTTGCCTCACAGAACACTTCATGATCACCTACATGCAACTAAAGCAGGAAAACCAGTGCTGAATTGGGGTAGGCGACATAAAATTGCGTTAGGTATAGCTAGAGGGCTTGCATATCTTCATACAGGACTTGATGCTCCAATTACTCATGGGAGTGTTAGATCCAAGAACGTGCTTGTGGAGGATTTTTTTGTTGCCAGGCTCACTGAGTTCGGGCTTGACAAGCTAATGATTCCGGCTGTAGCAGATGAAATGGTGGCACTTGCCAAGACTGAAGGCTACAAGGCCCCAGAGCTCCAACAGATGAAGAAATGTAATGCAAGAACGGATGTTTATGCATTTGGCATACTGCTGTTGGAGATTTTGATTGGGAAGAAAGCAGGAAAAAATGGAAGAGCTGGTCAGTATGTGGACTTGCTGTCAATGGTGAAAGTGGCAGTTCTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAGATTTTGAAAGGGATAAGAAGTCCCATGGAAGAAGGGTTGGTTCACGCATTGAAGCTAGCAATGGGATGCTGTGCCCCGGTGGCTTCGGTTAGACCCACCATGGATGAAGTTGTGAGACAGTTGGAGGAGAACAGACCAAGAAACAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGAAGTGGTACTCCTCTTGGATAG 2049 0.4431 MAVTKLFSLYIFISFFFLCHTQSHSSSSSSDIDLLLGKIRASPQGNTKNIVLSFWNTSVPLCQWRGLKWVFSNGSSLSCTDFSSPQWTNLSLYKDPSLHLLSLRLPSANLSGSLPKEVSEFPMLQSLYLDINSLKGAIPLELGYMSSLSEIDLGENFLTGALPPSIWNLCDRLVSLRLHGNLLSGSVPKPALPNCSCENLRFLDLGKNNFSGYFPEFITHFVGLKQLDLGDNMFEGSVPQSLGGVRLEKLNLSHNNFSGVLPTFQESKFGLEVFEKNNPDLCGPPLRSCSGNSKAGLSSGAIAAVVISLLAGSVVLSSLLIGYMEMKKRKKGRGESDDEFEEEEEDEENGNSNNNCGGADGEGKLMLFQGGENLKLDDVLNAAGHVMEKTLYSVFPAKLADGGGTIALRLLIEDCSKDRASSLPVIKQWGKIRHENLIPLRAFYQGKRGEKLLIYDYLPHRTLHDHLHATKAGKPVLNWGRRHKIALGIARGLAYLHTGLDAPITHGSVRSKNVLVEDFFVARLTEFGLDKLMIPAVADEMVALAKTEGYKAPELQQMKKCNARTDVYAFGILLLEILIGKKAGKNGRAGQYVDLLSMVKVAVLEETTMEVFDVEILKGIRSPMEEGLVHALKLAMGCCAPVASVRPTMDEVVRQLEENRPRNRSALYSPTETRSGSGTPLG 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0410 682 SUPERFAMILY L domain-like 59 274 - -
Bisa10g0410 682 MobiDBLite consensus disorder prediction 331 357 - -
Bisa10g0410 682 MobiDBLite consensus disorder prediction 662 682 - -
Bisa10g0410 682 Gene3D Ribonuclease Inhibitor 246 293 IPR032675 -
Bisa10g0410 682 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 95 187 - -
Bisa10g0410 682 FunFam Leucine-rich repeat receptor-like protein kinase 197 289 - -
Bisa10g0410 682 MobiDBLite consensus disorder prediction 660 682 - -
Bisa10g0410 682 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 100 658 - -
Bisa10g0410 682 Gene3D Transferase(Phosphotransferase) domain 1 393 674 - -
Bisa10g0410 682 ProSiteProfiles Protein kinase domain profile. 380 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0410 682 SUPERFAMILY Protein kinase-like (PK-like) 394 662 IPR011009 -
Bisa10g0410 682 Pfam Leucine rich repeat 199 257 IPR001611 GO:0005515
Bisa10g0410 682 Gene3D Ribonuclease Inhibitor 35 169 IPR032675 -
Bisa10g0410 682 Gene3D Ribonuclease Inhibitor 170 245 IPR032675 -
Bisa10g0410 682 Pfam Protein tyrosine and serine/threonine kinase 390 656 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0410 Bisa-ChrBisa10 8925330 8940152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0410 1 681 Receptor kinase-like Gene Family AT3G24660 67.398 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa10g0410 PK_Tyr_Ser-Thr 2.4e-21 CL0016