Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0398 ATGGTTTCATTACATACAGTTACAGCTATGGAGGAAGAAAACGCTTTGGATGTGCACGAAAGAGAGATCTGGCTGCAAGATGACCAAGACGATCTTCTTGGTGTGAACGATGCTTCCATGTTCTACGCCGATTTCCCTCCTCTCCCTGATTTCTCATGCATGTCATCCTCCTCCTCGTCTTCCTCGGCTCCGGCGCTTCCGGTCAAGACCCTCACCACCTCGTCCTCCCTGTCCTCCACCGCCACGTCATCCTCGTCCTCGGCCGCCTCATGGGCAGTCCTCAAGTCCGACGCCGAGGATAATATCCCGGTGGAGGATGCACCATCGCTACCACCACCACCACCACCATCTCTAGCAACCTTATCCTCCACCGCTTCCACAGAGATCCCGCTGCCATCGGAACACGGCGGCCTCCCTGCGGTTACGGCGGAGGATTGTATGACCACTATGGAGGAGCCGTTTCCATACATGGAAATGCTAGAGATCAACGATTTCTTTGACCCGACATTAATTTTTCAGGATGAGGATTACCCATTAGAAGAATTAGAATACTCACAAGATCATCAGACACATCATCAGGAGGAGCATGTAATTACGGTGCAGCAGCAGGCAGAGGATCAATATCAAGATCAAGTTGTGACATCTAATAATGAGGAAGAGAAGGCTGAAATTCAGTTAGGATCAGAAGATGGAATTAGAAGTCCAGATTGTGAAATGAGCGATGTGTTCTTGGAGTGGCTCAAGACGAACAGAGATAGTATTTCAGCGAACGATTTGAGGAGCGTGAAGCTCAAGAAATCGACCATAGAATGTGCTGCTAAGCGTTTAGGAGGAGGAAAAGAAGCCATGAAGCAATTGTTGAAGCTCATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAACAAGAGGAAGGAGAATGATAATAATAACAATAACAGTAGTGCGCCTTCAAATTTTGTCACAAACCCTAGCACTAATTCCAATCCAAATTCATTTGGACCCTGGATTTCTCAGCTTCCCCCGCCTTACGGAACAGATCCCGCAGCTATCGTGGCTGCCCCACCACCGAATTTTCCGGTGATTGGGTATCCAAGTGATCCGTATTCCAATGGAGCTCCAAATAGTATCACTTCTTACCAACCTGGGACGGAATATAACATGTTGGAATCAGCTCATTCATGGCCTCCATCGCATTTTGCTATTGCTCCCCACTATAACCAGTCATTTGGGGACAATAACCTTCCCCGAGCCAATCCACCGGTAAACCCGGGGGTGGCGGTAGCGTTTGACGGATACGGGAATCAGTATCCATATCAGTATTTTCATGGTCCGGCAGGTGATAAGATGATGAGGCTGGGTCCCTCGGCGACAAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGGAGGTATTTGTCTCATCCTAGGAGCCAGAAAAACCATGGCCAAGTACAGAATCATAGTGGTGATCATGACCCACTTGCAAGATTGGGAACTGATCGTAATTGCACCGCCGGCGTCGTCAATCCGGCCAATTGGATGTATTGGGCTTCTCTGGCTGGCGGGGGAGCTTCCGTAGGACCTCCAGTAATTCCGGCGGAACCGCGGGCAGGGCAGCCGGGGCTGGATCGGACTGCTTTGCAGACACAGAATTATCATCAGGGTAGTAGAGGAGTTTCATCAACAGATCACAGGAGACAGGGATGGAAGCCAGAGAAGAACTTGAGGTTCCTTTTACAGAAGGTGTTGAAGCAAAGCGATGTGGGTAGCTTGGGGAGAATTGTGTTGCCAAAAAAAGAGGCCGAAACACATTTGCCAGAACTGGAGGCAAGAGATGGCATTTCCATAGCTATGGAAGACATTGGAACTTCTCGTGTTTGGAATATGCGTTATAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTAGAGAACACTGGAGATTTCGTCAAAGCCAATGGACTCCAAGAGGGAGACTTCATAGTGTTATACTCAGACGTGAAGTGTGGCAAATTCTTGATAAGAGGAGTGAAAGTAAGGCAAGCAGCTTATGGGGCTAAAACTGCAGAGACCAAGAAAGCAGCTGGAAAATCGCAGAAAACTCTTGGAAATGCTAACAATGACTCTCCTTCACCATCTTCACCACAGAAAAAGATGAGAAAATAA 2169 0.4827 MVSLHTVTAMEEENALDVHEREIWLQDDQDDLLGVNDASMFYADFPPLPDFSCMSSSSSSSSAPALPVKTLTTSSSLSSTATSSSSSAASWAVLKSDAEDNIPVEDAPSLPPPPPPSLATLSSTASTEIPLPSEHGGLPAVTAEDCMTTMEEPFPYMEMLEINDFFDPTLIFQDEDYPLEELEYSQDHQTHHQEEHVITVQQQAEDQYQDQVVTSNNEEEKAEIQLGSEDGIRSPDCEMSDVFLEWLKTNRDSISANDLRSVKLKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRKENDNNNNNSSAPSNFVTNPSTNSNPNSFGPWISQLPPPYGTDPAAIVAAPPPNFPVIGYPSDPYSNGAPNSITSYQPGTEYNMLESAHSWPPSHFAIAPHYNQSFGDNNLPRANPPVNPGVAVAFDGYGNQYPYQYFHGPAGDKMMRLGPSATKEARKKRMARQRRYLSHPRSQKNHGQVQNHSGDHDPLARLGTDRNCTAGVVNPANWMYWASLAGGGASVGPPVIPAEPRAGQPGLDRTALQTQNYHQGSRGVSSTDHRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVLYSDVKCGKFLIRGVKVRQAAYGAKTAETKKAAGKSQKTLGNANNDSPSPSSPQKKMRK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0398 722 MobiDBLite consensus disorder prediction 457 494 - -
Bisa10g0398 722 Pfam B3 DNA binding domain 580 675 IPR003340 GO:0003677
Bisa10g0398 722 MobiDBLite consensus disorder prediction 306 334 - -
Bisa10g0398 722 SUPERFAMILY DNA-binding pseudobarrel domain 578 675 IPR015300 -
Bisa10g0398 722 MobiDBLite consensus disorder prediction 301 338 - -
Bisa10g0398 722 CDD BfiI_C_EcoRII_N_B3 577 678 - -
Bisa10g0398 722 MobiDBLite consensus disorder prediction 689 722 - -
Bisa10g0398 722 Gene3D - 575 694 IPR015300 -
Bisa10g0398 722 FunFam B3 domain-containing transcription factor FUS3 575 690 - -
Bisa10g0398 722 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 212 692 IPR044800 GO:0003700
Bisa10g0398 722 SMART B3_2 579 679 IPR003340 GO:0003677
Bisa10g0398 722 MobiDBLite consensus disorder prediction 102 140 - -
Bisa10g0398 722 ProSiteProfiles B3 DNA-binding domain profile. 579 681 IPR003340 GO:0003677
Bisa10g0398 722 MobiDBLite consensus disorder prediction 696 722 - -
Bisa10g0398 722 MobiDBLite consensus disorder prediction 462 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0398 Bisa-ChrBisa10 8197063 8200700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0398 14 712 B3 DNA Binding Superfamily AT3G24650 45.811 1.60e-158 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa10g0398 B3 4.6e-18 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0398 10 8197063 8200700 Bisa10g0398 10 8197063 8200700 ECH