Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0396 ATGGTTTTTTCTTCCATCCCAGCTTATCTCGATCCAGCCAACTGGCAACAACAGCAGCCACCCAATCATCAGATTGGAAGTAGTAGTGGCCCTAGTTCTCAGCTTCTTCCACCACCACCACCGCAGTCGCTCCCAGCGGCTCAGTCCCATGGAGCTGGTGTAGGCGGGACCGGCTCGATCAGGCCGGGTTCGATGGCCGATCGAGCCCGGATGGCTAACATACCGATGCCGGAGACTGCGCTAAAATGCCCGCGGTGTGAGTCCACCAACACCAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCCCGCCACTTCTGCAAGACCTGTAGGAGGTACTGGACTCGGAACGGCGCCTTGCGCAACGTCCCGGTTGGCGGGGGCTGCCGGAGAAACAAAAGGAGCAAAGGCAGCAGCTCAAAGTCGCCACCGGTGAGCTCAGATCGCCAGACGGGCAGCGCTAGTTCCGCAAACTCAGTGTCTTCTACCAATACTGGTCCAGCTTCTGATATAGTAGGCCTTTCGCCTCAGGTTCCTACTTTGAGGTTCATGGCTCCATTGCATCAACTAACTGAGTTTGGAACTGCAGAGATGGGCTTGAACTATGGATTGAGTAATTATACCGCAATTTCAGGTCCAATGGCAGGAGGAGGAGACTTAAATTTTCATATAGGAACCGCTTTTGGTGGCGGCGGTGCTGGGGCCGGCGGATCGATCTTATCGGCCGCCGGGTTAGAGCAATGGCGGCTTCCACATACACAACAATTTCCCTTCTTGGGTGGTTTGGAGGCTTCCCCGGGATTGTACTCTTTCGAAGGCGGTGGGGCAGCCGAGGCACCAGGATACGGCGGGGCGAGTCAGCTCCGGCCGAAGGTGTCGACTTCCGGGGTCATAACACAGCTAGCTTCAGTGAAAATGGAAGATCATGGGCATGGCCAAGGACTGAATTTGTCAAGGCATTTCTTGGAGATGAATAATCCATCAAGTCATGAGCAGTATTGGAGTAATACTTCCACTGGTAATTCTACTTCTGCAGCTAATTGGACTGATCTTTCTGGGTTTAGCTCTTCTTCCACTACTAGCAACAATCCACTATAG 1101 0.5341 MVFSSIPAYLDPANWQQQQPPNHQIGSSSGPSSQLLPPPPPQSLPAAQSHGAGVGGTGSIRPGSMADRARMANIPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRNGALRNVPVGGGCRRNKRSKGSSSKSPPVSSDRQTGSASSANSVSSTNTGPASDIVGLSPQVPTLRFMAPLHQLTEFGTAEMGLNYGLSNYTAISGPMAGGGDLNFHIGTAFGGGGAGAGGSILSAAGLEQWRLPHTQQFPFLGGLEASPGLYSFEGGGAAEAPGYGGASQLRPKVSTSGVITQLASVKMEDHGHGQGLNLSRHFLEMNNPSSHEQYWSNTSTGNSTSAANWTDLSGFSSSSTTSNNPL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0396 366 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677|GO:0006355
Bisa10g0396 366 MobiDBLite consensus disorder prediction 139 172 - -
Bisa10g0396 366 MobiDBLite consensus disorder prediction 13 32 - -
Bisa10g0396 366 MobiDBLite consensus disorder prediction 13 64 - -
Bisa10g0396 366 Pfam Dof domain, zinc finger 80 135 IPR003851 GO:0003677|GO:0006355
Bisa10g0396 366 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 57 255 IPR045174 GO:0003700|GO:0006355
Bisa10g0396 366 MobiDBLite consensus disorder prediction 125 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0396 Bisa-ChrBisa10 8148119 8149516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0396 1 358 C2C2-Dof Transcription Factor Family AT2G37590 38.802 4.33e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa10g0396 zf-Dof 3.8e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0396 10 8148119 8149516 Bisa06g0491 06 12387670 12388967 CCT
Bisa10g0396 10 8148119 8149516 Bisa10g0396 10 8148119 8149516 ECH