Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0377 ATGCAATTGAAGCTTACGCTATCAAATTCCCCGATCGACTGGGATTTGCACTTGGAAATGAAGGAGAGGCAACGTTGGAGAGCTGAAGAGGACGCCTTATTACGTGCCTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAGCGCATGAACACACCCCTTAACCGGGATGCTAAATCCTGCTTAGAAAGGTGGAAAAACTACCTCAAACCTGGCATTAAGAAGGGATCTCTCACTGAAGAAGAGCAACGTCTCGTCATCCGGCTTCAAGCGAAACATGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGAACTGCTAAGAGATTAGGCAAGTGGTGGGAAGTGTTCAAAGAGAAGCAGCAGAGAGAGAAAAAGGAGAACAACAAAACAGTTGATCCAATTGACGACACCAAGTACGATCATATACTCGAGACTTTTGCCGAGAAGCTGGTGAAAGAACGACCTTCCCCATCATATCTCATGGCAGCTTCTAATGGAGCCTTCATTCATACTGATCCACCAGCTCCAACATCAGCTATGCTTCCTCCATGGCTTTCTAATTCTAATACCACTACTGCTATTAGGCCACCTTCCCCTTCTGTGACACTAAGTCTCTCTCCCTCAACAGTGGCAGCACCGCCTCCATTTCAATGGCTTCAACCTGAGAGAGCACCTGAGAATGCTCCTCTTGTTATAGGGAATGTACCAACACCACATGGAACTATGCCGGCTTTTGGTGATAACATGCTCGTATCTGAGCTGGTTGAGTGCTGTAAAGAGTTGGAAGAAGGGCACCGGGCATGGTCATCACATAGGAAGGAAGCGGCCTGGAGGTTGAGGAGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCATGTCGGAGGCGGGAGAAGATGGAAGATATTGAAGCGAAAATTAAAGCTCTTCGGGAAGAACAGAAGGCAGCTTTGGATAGAATTGAAGCAGAGTACCGGGAGCAGCTAGCCGGTCTGAGAAGAGATGCAGAAACCAAGGAGCAGAAATTGGCTGAGCAATGGGCCTCAAAGCACTTGAGGCTTTCTAAGTTTCTAGAGCAGATAGGGTGCAGACCAAGGCTTCCTGAGCCAAATGGAAGATGA 1134 0.4797 MQLKLTLSNSPIDWDLHLEMKERQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKENNKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASNGAFIHTDPPAPTSAMLPPWLSNSNTTTAIRPPSPSVTLSLSPSTVAAPPPFQWLQPERAPENAPLVIGNVPTPHGTMPAFGDNMLVSELVECCKELEEGHRAWSSHRKEAAWRLRRVELQLESEKACRRREKMEDIEAKIKALREEQKAALDRIEAEYREQLAGLRRDAETKEQKLAEQWASKHLRLSKFLEQIGCRPRLPEPNGR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0377 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Bisa10g0377 377 FunFam MYB-related transcription factor 23 77 - -
Bisa10g0377 377 Gene3D - 81 141 - -
Bisa10g0377 377 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 72 IPR017930 -
Bisa10g0377 377 Coils Coil 304 346 - -
Bisa10g0377 377 SMART sant 77 125 IPR001005 -
Bisa10g0377 377 SMART sant 22 74 IPR001005 -
Bisa10g0377 377 CDD SANT 25 72 IPR001005 -
Bisa10g0377 377 ProSiteProfiles Myb-like domain profile. 18 72 IPR001005 -
Bisa10g0377 377 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 20 372 - -
Bisa10g0377 377 Pfam Myb-like DNA-binding domain 26 87 - -
Bisa10g0377 377 Gene3D - 23 77 - -
Bisa10g0377 377 SUPERFAMILY Homeodomain-like 23 117 IPR009057 -
Bisa10g0377 377 CDD SANT 82 123 IPR001005 -
Bisa10g0377 377 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0377 Bisa-ChrBisa10 7715971 7719660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0377 20 368 MYB Transcription Factor Family AT2G37630 69.272 1.15e-171 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa10g0377 Myb_DNA-bind_6 2.6e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0377 10 7715971 7719660 Bisa10g0377 10 7715971 7719660 ECH