Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0363 ATGGAGATGAGACGGAGGCGAAGGAGAGGAGGATTGGTGGAAACCTGGGTTTACTTCGTGAAAATCAGGGACGATAAGGCAAAAGGATCCTCCTATGATAGTATTGTTGACGATGTTATTGTAGAGTTTGCACCAGATGAGACTGATAGAATTAGGCGTAGAAGGGGGGAAACAAACCCCTCATCTGGTGCGAACAACGCTCTGCCAATTAATAAATTTAAGAGTGAGGAACTGTTAGTCTGGTACCGTGATCCAACGGGAGGTGCTTTCTTGTCGGATGCTGTTGCTGAAAATAATGGTCGTGCTTTGGGTTCTGAGCAAAATAACGGAGGAGTCGGAGAAGAAGCATCTACAAACGAATCAGAAGATAGAAAAAATTTTAATTCCGCAAATGGACAGGCATCAATCATTCAAACACACGGTGATCGGATTAATGGAGATGTGATTGAAGAGAAAGTGCTAAAGGATGTCAAAGCAAGTAGTTCGTACCGGAGTTGCTGTGTTGTTGTAAATGAAATGCAGAGGTGTATCTATGCAATTCCAAATCGGCCCTTACGTGACACTAATGAGATGATCAACCTTCAGAAGGACGTTGATGAGTCCCGTTACGGAATCTGGTTTAAAGAGATGGCAAAACAACTGTTAGATCTGAACGTTTCAATCTTTAGCATGGCACCTGTTGAGAGGAAATATGCATTTGAACGATCTGAAATACCTGCGGCTAAAAATTATGTACTGAAAATCAACTATCCATTCAAGGTTAGCTGGTGCAAATTTGAGGTGGTTGTTGAATCTCCTAAAGATATAAGTTCAGCCTCCTCAAAAAAGTCAAAATTCTGTTTGGAGATTCCTCCTCTGATTGACACTCCCATGGTGGCTTCAGAATGGAAGAGACCCGGAATGCTGACCTATTTTTCTGTTGTTCATAAGCCTGATGGAGGCATATTTCCTTTGGGATTTAGTAAGGAGGTTACAAATCGAAACACAAAAGCTGGCTCAAATGTTCTGTGTGATGAAAACAGTGAAAGGGATTTACTAAACTTCCTCATGATAGAATCACACAAGTTGGACAGTGATGTTCTTGTTGGACATAACATTCCTGGATTTGTCCCGGATGTTCTTCTCCAGATATGCCAGGCTTGCAAAGTGCCAAGCAGCATGTGGTCCAAAGTAGGCCGCCTTAAGCAGTCTGGGATGCCTAAACTTGCCAGAGTAAGCACTGTTTCTTGTTCTGGAGCTACTCCTGGCATCATATCTTGCATTGCTGGTCGGCTTCTTTGTGATACATACTTGTGTGCCCGTGACCTATTAAAGGAGGTTAGCTACTCTTTATCTCAACTTGCAAAAACTCAGCTGAATAAAGATCAGAAGGAAGTTGCTCCACATGATGTTTCAAAAATGTTCCAATCAGCCGAATCCCTTATGGAGCTTATTGAATATGGTGAGACAGATGCATGGTTATCTATGGAACTCATGTTTCATTTGAGTGGTGCAAGGGCACAGAGAGTGCAGTATCTTTTGTTGCATGCCTTCCATGCAAAGAAATATATTGTGCCAGACAAGATTCCTCCCCATGCAAAAGAAACAAAATTGACGAAACACAGAGTAACTCATGGTGAGGATGGCAACTTTGATGAAGCAGATATAGATTATGCAAACTATGGCAATGGTGCTCCCCACAGTGATAAAGGGAAAAGCATAAAGGCTCCCTCCTATGCTGGAGGACTGGAATACAATATCTGCTTCACAATTGAAAGAGCTCCTGATGGATCTTTCCCTCGTCTGCCATCTAGTAGAACAACTGGTGTTTTGCCAGAGTTGCTGAAAGATTTAGTTCAAAGGAGAAGGGTAAAGTCATGGATGAAAACTGCATCAGGTCTTTACGTTCAACAACTGGACATTCAGCAACAAGCACTGAAGCTTACTGCAAACAGTATCTATGGATGCCTAGGATTTGCTAATTCAAGATTTTGTGCAAAGCCACTAGCCGAGCTAATAACCCTACAAGGAAGGGAGATACTACAAAGTACTGTCGATCTTGTTCAGAATAACTTGAACTTAAAAGAGGTGATCTATGGTGATACAGATTCAATAATGATTTATAGTGGGCTAGATGATATTGCGAAAGCAATAGTAATGGCTGGAAAAATTATTCAAGAGATCAACAAGAAATATAGGTTCTTGGAAATTGATCTTGATGGTTCGTACAAGAGAATGCTACTTCTTAAGAAAAAGAAATATGCAGAGGTGAAGGTTATTGAGCGTAAAGGGCTTGATATTGTTGGTCGTGACTGGAGCCTATTAGCTAAAGAAATAGGAGATTTTTGCCTAAGTCAAATTTTGATACCTTTGCATGTCATTATTTTGGTGGCAAAGAGATTGAAACAAAAGGGTTATTCCGCTGGTTGCTCTGTTGGTGATACAATCCCCTGTATAATATGCTATGAACAGGGCAGTAGTTTAGGCAGTGCAGCAAGCATTGCTCAGCGTGCTAGATATCTTGATGAACTAAAACAAGAACAAGGGAAATGGCTGATTGACGTTGATTATTACGTGTCACAACAGATTCGTCCTATGGTATCACGTCTGTGTGCATCAATTCAGGGCACAAGCCCAGGAAGACTAGCTGGTTGTTTAGGGCTTGATGCATCAAAATTTCAACATAAATCTAGTGAAGCCTTCAGCAGTGATCCTTCAAGCTCCCTCTTGTTTGCTGCTGATGTTGAAGAGAGGTAG 2736 0.4145 MEMRRRRRRGGLVETWVYFVKIRDDKAKGSSYDSIVDDVIVEFAPDETDRIRRRRGETNPSSGANNALPINKFKSEELLVWYRDPTGGAFLSDAVAENNGRALGSEQNNGGVGEEASTNESEDRKNFNSANGQASIIQTHGDRINGDVIEEKVLKDVKASSSYRSCCVVVNEMQRCIYAIPNRPLRDTNEMINLQKDVDESRYGIWFKEMAKQLLDLNVSIFSMAPVERKYAFERSEIPAAKNYVLKINYPFKVSWCKFEVVVESPKDISSASSKKSKFCLEIPPLIDTPMVASEWKRPGMLTYFSVVHKPDGGIFPLGFSKEVTNRNTKAGSNVLCDENSERDLLNFLMIESHKLDSDVLVGHNIPGFVPDVLLQICQACKVPSSMWSKVGRLKQSGMPKLARVSTVSCSGATPGIISCIAGRLLCDTYLCARDLLKEVSYSLSQLAKTQLNKDQKEVAPHDVSKMFQSAESLMELIEYGETDAWLSMELMFHLSGARAQRVQYLLLHAFHAKKYIVPDKIPPHAKETKLTKHRVTHGEDGNFDEADIDYANYGNGAPHSDKGKSIKAPSYAGGLEYNICFTIERAPDGSFPRLPSSRTTGVLPELLKDLVQRRRVKSWMKTASGLYVQQLDIQQQALKLTANSIYGCLGFANSRFCAKPLAELITLQGREILQSTVDLVQNNLNLKEVIYGDTDSIMIYSGLDDIAKAIVMAGKIIQEINKKYRFLEIDLDGSYKRMLLLKKKKYAEVKVIERKGLDIVGRDWSLLAKEIGDFCLSQILIPLHVIILVAKRLKQKGYSAGCSVGDTIPCIICYEQGSSLGSAASIAQRARYLDELKQEQGKWLIDVDYYVSQQIRPMVSRLCASIQGTSPGRLAGCLGLDASKFQHKSSEAFSSDPSSSLLFAADVEER 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0363 911 Pfam DNA polymerase family B, exonuclease domain 321 446 IPR006133 -
Bisa10g0363 911 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 156 253 - -
Bisa10g0363 911 Gene3D - 174 278 - -
Bisa10g0363 911 SUPERFAMILY DNA/RNA polymerases 515 881 IPR043502 -
Bisa10g0363 911 Gene3D - 285 493 IPR036397 GO:0003676
Bisa10g0363 911 PRINTS DNA-directed DNA-polymerase family B signature 690 698 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa10g0363 911 PRINTS DNA-directed DNA-polymerase family B signature 636 648 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa10g0363 911 Gene3D Helix hairpin bin 602 652 - -
Bisa10g0363 911 MobiDBLite consensus disorder prediction 101 129 - -
Bisa10g0363 911 Gene3D - 782 894 IPR042087 -
Bisa10g0363 911 MobiDBLite consensus disorder prediction 101 116 - -
Bisa10g0363 911 SMART polmehr3 260 704 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa10g0363 911 FunFam DNA polymerase 602 650 - -
Bisa10g0363 911 SUPERFAMILY Ribonuclease H-like 162 519 IPR012337 -
Bisa10g0363 911 ProSitePatterns DNA polymerase family B signature. 692 700 IPR017964 GO:0000166|GO:0003676
Bisa10g0363 911 Gene3D - 494 521 - -
Bisa10g0363 911 Pfam DNA polymerase family B 495 782 IPR006134 GO:0000166|GO:0003677
Bisa10g0363 911 NCBIfam DNA polymerase (pol2) 305 781 - -
Bisa10g0363 911 CDD DNA_polB_alpha_exo 287 496 - -
Bisa10g0363 911 Gene3D Palm domain of DNA polymerase 577 748 IPR023211 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0363 Bisa-ChrBisa10 7054486 7075974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0363 157 911 Core DNA Replication Machinery Family AT5G67100 50.417 0.0 836