Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0348 ATGGAAGAAGATCAATGTTGGATGTGGACAAAGAGAAAGTACTCTTTGACTAGCTCTAACATTCTTGCTTCAACACTCAAGCCCTCCTATGATGAATCATGGGAAGAACAAGCTTTCTCAGAAGAACAAGCTTTCATATGGCCTCCAAGATCATACCCTTGCAGCTTTTGCAGCAGAGAATTCAGGTCAGCTCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGACAGAGCCAGACTGAAACAACCCCCAAGTGAAGATGATGATGATCATCATCATATTCATCAAAGTCCCTTGACATCTCCAAACACTAACTCTAATTCTGATCGTCTTAATCTTCTTGCTTCCAACCCTAAATTCCCACCTTGTTATGATTCTAAATCATGGTCACAGAAGTTTGATACTAAGAAGGAGGTGGAAGCTGCTGAAATAGACAGAAGAGAATCATCCGGGGTTTTGAGTTTGGTAGGTCTGAAATATACGGAGAGTTTGCTTGTTAAGTTTTTGGAGGCACTGGTGGCAGAAGGTGCACATGGAGAGAAACTGTCGTTTCTCTGTGCATTTGAACTTTAA 576 0.4184 MEEDQCWMWTKRKYSLTSSNILASTLKPSYDESWEEQAFSEEQAFIWPPRSYPCSFCSREFRSAQALGGHMNVHRRDRARLKQPPSEDDDDHHHIHQSPLTSPNTNSNSDRLNLLASNPKFPPCYDSKSWSQKFDTKKEVEAAEIDRRESSGVLSLVGLKYTESLLVKFLEALVAEGAHGEKLSFLCAFEL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0348 191 MobiDBLite consensus disorder prediction 68 113 - -
Bisa10g0348 191 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Bisa10g0348 191 MobiDBLite consensus disorder prediction 71 97 - -
Bisa10g0348 191 Pfam C2H2-type zinc finger 52 76 - -
Bisa10g0348 191 Gene3D Classic Zinc Finger 48 118 - -
Bisa10g0348 191 SMART c2h2final6 52 74 IPR013087 -
Bisa10g0348 191 PANTHER OS07G0101800 PROTEIN 28 136 - -
Bisa10g0348 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Bisa10g0348 191 SUPERFAMILY beta-beta-alpha zinc fingers 49 78 IPR036236 -
Bisa10g0348 191 MobiDBLite consensus disorder prediction 98 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0348 Bisa-ChrBisa10 6835880 6839387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0348 27 83 C2H2 Transcription Factor Family AT2G37740 72.881 1.62e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa10g0348 zf-C2H2_6 1.8e-07 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0348 10 6835880 6839387 Bisa10g0348 10 6835880 6839387 ECH