Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa10g0348 | ATGGAAGAAGATCAATGTTGGATGTGGACAAAGAGAAAGTACTCTTTGACTAGCTCTAACATTCTTGCTTCAACACTCAAGCCCTCCTATGATGAATCATGGGAAGAACAAGCTTTCTCAGAAGAACAAGCTTTCATATGGCCTCCAAGATCATACCCTTGCAGCTTTTGCAGCAGAGAATTCAGGTCAGCTCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGACAGAGCCAGACTGAAACAACCCCCAAGTGAAGATGATGATGATCATCATCATATTCATCAAAGTCCCTTGACATCTCCAAACACTAACTCTAATTCTGATCGTCTTAATCTTCTTGCTTCCAACCCTAAATTCCCACCTTGTTATGATTCTAAATCATGGTCACAGAAGTTTGATACTAAGAAGGAGGTGGAAGCTGCTGAAATAGACAGAAGAGAATCATCCGGGGTTTTGAGTTTGGTAGGTCTGAAATATACGGAGAGTTTGCTTGTTAAGTTTTTGGAGGCACTGGTGGCAGAAGGTGCACATGGAGAGAAACTGTCGTTTCTCTGTGCATTTGAACTTTAA | 576 | 0.4184 | MEEDQCWMWTKRKYSLTSSNILASTLKPSYDESWEEQAFSEEQAFIWPPRSYPCSFCSREFRSAQALGGHMNVHRRDRARLKQPPSEDDDDHHHIHQSPLTSPNTNSNSDRLNLLASNPKFPPCYDSKSWSQKFDTKKEVEAAEIDRRESSGVLSLVGLKYTESLLVKFLEALVAEGAHGEKLSFLCAFEL | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa10g0348 | 191 | MobiDBLite | consensus disorder prediction | 68 | 113 | - | - | |
Bisa10g0348 | 191 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 54 | 74 | IPR013087 | - | |
Bisa10g0348 | 191 | MobiDBLite | consensus disorder prediction | 71 | 97 | - | - | |
Bisa10g0348 | 191 | Pfam | C2H2-type zinc finger | 52 | 76 | - | - | |
Bisa10g0348 | 191 | Gene3D | Classic Zinc Finger | 48 | 118 | - | - | |
Bisa10g0348 | 191 | SMART | c2h2final6 | 52 | 74 | IPR013087 | - | |
Bisa10g0348 | 191 | PANTHER | OS07G0101800 PROTEIN | 28 | 136 | - | - | |
Bisa10g0348 | 191 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 52 | 79 | IPR013087 | - | |
Bisa10g0348 | 191 | SUPERFAMILY | beta-beta-alpha zinc fingers | 49 | 78 | IPR036236 | - | |
Bisa10g0348 | 191 | MobiDBLite | consensus disorder prediction | 98 | 113 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa10g0348 | Bisa-ChrBisa10 | 6835880 | 6839387 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa10g0348 | 27 | 83 | C2H2 Transcription Factor Family | AT2G37740 | 72.881 | 1.62e-23 | 93.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bisa10g0348 | zf-C2H2_6 | 1.8e-07 | CL0361 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa10g0348 | 10 | 6835880 | 6839387 | Bisa10g0348 | 10 | 6835880 | 6839387 | ECH |