Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0316 ATGGAGGAGAGTCTTCAGCCTTACCATGTTCCCCAGCAAAGCAGAAGAGAGAAACTCAGATTCACTCCCCCGGGGTCCGCAGGTTTACTCCCTTCGTTGGTTCCCTCCGATTTGCTAACGTGCGCCAACACCAATCCTGAATCCTCGAATTTGCAAGTCGACCCCTCAACTTTTCAAATTATCAACGACAACCCCTTCCTCAATTTCCCCACTCAAAGCCTACAAGCCGAGCCATTGTCCTTATCTCTCTCATCGGTCCAAAATAATAATAGTAATAATATTCAGAGATTCGCATCGTCGAACGACGTCGTTCCGAGGAGCTCCGTTGGGCCATTTATGGGCCACTCTTCGGTGTTTAAGGGATCGAGGTTCCTGAAGCCAGCTCAGCAGTTGTTGGAGGAGCTTTGCGATGTTGGGAGGCGTGGAATTCACGCGGTGGAGACGTCGTCGTTTTTGGAACCTCCGCAGGAGAGCTTGAGCTCCGGCGATCGGCCGCCGTACGAGGGTGAGGGCGGGAAGAAGAAGTCGGGACTATTGAACATGCTTGATGAGGTGTACAAGAGGTACAGGCAGTTCTACCAACACGTGCAAGCAATAGTAACTTCATTCGAGTACGTTTCGGGGCTGTCTAACGTAGCTCCATATGCAAGCTTGGCCATGAAAGCCATGTCCAAACACTTTAAGTGCTTGAAGAATGTGATCACCCACCAGCTTCACTTCAACAAGTATGGCCAAATTAGGGCTAGTCAGAATCCTGAATTCCTAGGGCACCAACCTGGTTGGCGACCACAAAGAGGACTCCCCGAGCGAGCCGTGGCGGTTCTTAGGGCGTGGTTGTTCGAGCACTTTCTTCATCCTTATCCCACTGATAAAGACAAGCTAATCCTGGCCAAACAAACTGGTCTCTCTCGTAGTCAGGTGGCAAACTGGTTCATTAATGCGAGAGTAAGACTGTGGAAACCAATGGTGGAAGAAATACACATGCTAGAAACACGACAACCTCAAAAAAACACTCACACGTCAGATCAAGACCAAAACAAGAGCAAGAACAAGCTTCCCAGCAGTGACAATTTTCATCAAGATCATGTTCCTTTCAATAAACGCACCAGAACCTATGAACCTTCCCATTATACTATGCCAGTGACCAATGTGGGAGTGACACATGGCTTCTCCCTCACGCTGGGTCTCCACCAGAATAATGCTGGGCTTGCTGTATCTGAACCCTTTCCCTTGAATGAAACTCGCCTTTTTGGCCTTGCTGTGCCTGTGAGTGGTTCTGAATCTCAGAATCTGCATCACTTCGTTGGCTAA 1311 0.4905 MEESLQPYHVPQQSRREKLRFTPPGSAGLLPSLVPSDLLTCANTNPESSNLQVDPSTFQIINDNPFLNFPTQSLQAEPLSLSLSSVQNNNSNNIQRFASSNDVVPRSSVGPFMGHSSVFKGSRFLKPAQQLLEELCDVGRRGIHAVETSSFLEPPQESLSSGDRPPYEGEGGKKKSGLLNMLDEVYKRYRQFYQHVQAIVTSFEYVSGLSNVAPYASLAMKAMSKHFKCLKNVITHQLHFNKYGQIRASQNPEFLGHQPGWRPQRGLPERAVAVLRAWLFEHFLHPYPTDKDKLILAKQTGLSRSQVANWFINARVRLWKPMVEEIHMLETRQPQKNTHTSDQDQNKSKNKLPSSDNFHQDHVPFNKRTRTYEPSHYTMPVTNVGVTHGFSLTLGLHQNNAGLAVSEPFPLNETRLFGLAVPVSGSESQNLHHFVG 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0316 436 SUPERFAMILY Homeodomain-like 262 328 IPR009057 -
Bisa10g0316 436 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 67 348 - -
Bisa10g0316 436 MobiDBLite consensus disorder prediction 333 360 - -
Bisa10g0316 436 MobiDBLite consensus disorder prediction 330 365 - -
Bisa10g0316 436 Pfam Homeobox KN domain 278 317 IPR008422 GO:0003677|GO:0006355
Bisa10g0316 436 FunFam BEL1-like homeodomain protein 9 264 326 - -
Bisa10g0316 436 Pfam Associated with HOX 119 235 IPR006563 -
Bisa10g0316 436 SMART HOX_1 261 325 IPR001356 GO:0003677
Bisa10g0316 436 MobiDBLite consensus disorder prediction 152 174 - -
Bisa10g0316 436 Gene3D - 264 326 - -
Bisa10g0316 436 CDD homeodomain 261 322 IPR001356 GO:0003677
Bisa10g0316 436 SMART prehox3 113 236 IPR006563 -
Bisa10g0316 436 ProSiteProfiles 'Homeobox' domain profile. 258 321 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0316 Bisa-ChrBisa10 6129806 6136358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0316 1 436 Homeobox Transcription Factor Family AT5G02030 38.038 3.24e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa10g0316 POX 1e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0316 10 6129806 6136358 Bisa10g0316 10 6129806 6136358 ECH