Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0293 ATGGCTTCAACTATACAGATGTCCCGTGCAGATTTAGAGCAAGGAAGCGACAACATGAGTGCTGAAAACAGCGTTTGCTTCTCTGATGCTGAGGATGGCTCTTCCTATTCCCATTTCTACTCAACAAATGGTGGGTCCTACGATGAGTACAGCTTTGCTTGTGTTTCCGATGATCCTGAGGCTGTCGGGGCTGCTGTTACTGATTCTGGAAGGGCTTCTTCTGTCTCTGATTGTTCTGCGGAGGTGGAAATTGAAAGTGGGGTTCTTGAAATTAAGGTGCATTTGGCCAAAACAGAGAGGGATTGCAGGATTTGCCACATGGGTTTGGAGAGTGAAAGCCATGAATCTGGGGTTCCAATTGAATTGGGATGTTCCTGCAAGGATGATCTAGGAACTGCTCATAAGAACTGTGCTGAGACCTGGTTCAAGATTAAAGGGAACAGGACCTGCGAAATTTGCCACACTGTTGCGAGGAACGTTTATGCTGTGAACGAGGAGGCAATCGAGAATTTAAGTGACAGCAACAATGCTACTGCAGTATCCGCAACTTCAGTGCCAGCTCCCTCAGAAACTCGAAGGTTTTGGCATGGCCATCGGTTCCTGAATTTCCTGCTTGCTTGTATGGTTTTTGCATTTGTCATATCCTGGCTTTTTCACTTCAACGTGCCATCATCCTAG 678 0.4661 MASTIQMSRADLEQGSDNMSAENSVCFSDAEDGSSYSHFYSTNGGSYDEYSFACVSDDPEAVGAAVTDSGRASSVSDCSAEVEIESGVLEIKVHLAKTERDCRICHMGLESESHESGVPIELGCSCKDDLGTAHKNCAETWFKIKGNRTCEICHTVARNVYAVNEEAIENLSDSNNATAVSATSVPAPSETRRFWHGHRFLNFLLACMVFAFVISWLFHFNVPSS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0293 225 SMART ringv_2 101 154 IPR011016 GO:0008270
Bisa10g0293 225 PANTHER ZINC FINGER, RING-CH-TYPE 11 224 - -
Bisa10g0293 225 CDD RING_CH-C4HC3_MARCH 102 154 - -
Bisa10g0293 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 164 IPR013083 -
Bisa10g0293 225 SUPERFAMILY RING/U-box 99 157 - -
Bisa10g0293 225 Pfam RING-variant domain 102 153 IPR011016 GO:0008270
Bisa10g0293 225 ProSiteProfiles Zinc finger RING-CH-type profile. 94 160 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0293 Bisa-ChrBisa10 5741482 5744884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0293 66 225 C3H Transcription Factor Family AT5G05830 60.494 4.06e-66 201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0293 10 5741482 5744884 Bisa10g0293 10 5741482 5744884 ECH