Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0291 ATGGAAGGCGATGAAACAAGCGCTGTCGAGCACGCCGGACCGGCCGCTGTCGACGGCGGCGGTGGTGACGTAGGAAGTGGCGACGAGGGTTTGACGGGGGTGGGCGAGGGAGGTGGAAGCAGCTCCCACGGGACTAGAGACAGAGTGAAAGGGCCTTGGTCTCCAGAGGAAGACGCGATACTGAGTCAGCTCGTCAGCAAGTTCGGGGCCAGAAATTGGAGCTTAATTGCCCGCGGGATCTCTGGACGATCGGGCAAATCTTGCCGGCTCCGGTGGTGTAATCAGCTCGACCCAGCTGTGAAGCGCAAACCTTTTACTGACGAGGAGGACCGGATCATTGTTGCAGCACATGCAGTCCATGGGAACAAATGGGCAGCCATTGCCAGGCTTCTACAAGGAAGAACAGATAATGCCATTAAGAACCACTGGAATTCCACTTTGAGGCGTCGGGGAGTGGAACTTGATAAGATGAAGTTAGAATCTTGCAACGTAGTTGAAGATGTTAGCTTGGACAAAGCAAAAGCATCATCAGAAGAAACTCATTCATATGGGGATGTTAATTCCTTGAGATCCTCAGAAGGAAGAGATGTCAGTTCTGTAGAGGCTATGGATGATAAATATGAAGACAAAGCACAGACAGAGGGTCAATTAAATTATCAAGTCAAGGATCTGCCTACTCTTTTCCGACCAGTAGCCCGTGTCAGTGCTTTTAGTGTATATAACTCATTGGATGCACAGCCTCCAATGTTAACACAAAGGCCAGTTCCAACACAAGGACCTCTTTTTCATGCCTCAAAACCGGGTATTGAAATATGTAAAATGCTGGAAGGAATTTATGGATGTGACCAATCTGTGCCTCACCAGTGTGGCCATGGTTGCGGTGCTGCTCCAAATGGTGAAAATCCCAAAAGTTCCTTGTTGGGGCCGGAATTCATCGAATTTTCAGAACCCCCATCTTTCCCAAGTTTTGAGTTAGCAGCAATAGCTACAGACATTAGTAACCTTGCTTGGCTTAAAAGTGGATTGGAGAATAGCAGTGTGAAAATGATGGGTGACTCAGCTGGCAGGGTAATATCTCATGGATCTCAAGTGCATATTGGCCATTAA 1107 0.4842 MEGDETSAVEHAGPAAVDGGGGDVGSGDEGLTGVGEGGGSSSHGTRDRVKGPWSPEEDAILSQLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHAVHGNKWAAIARLLQGRTDNAIKNHWNSTLRRRGVELDKMKLESCNVVEDVSLDKAKASSEETHSYGDVNSLRSSEGRDVSSVEAMDDKYEDKAQTEGQLNYQVKDLPTLFRPVARVSAFSVYNSLDAQPPMLTQRPVPTQGPLFHASKPGIEICKMLEGIYGCDQSVPHQCGHGCGAAPNGENPKSSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSAGRVISHGSQVHIGH 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0291 368 ProSiteProfiles Myb-like domain profile. 45 96 IPR001005 -
Bisa10g0291 368 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Bisa10g0291 368 Gene3D - 104 150 - -
Bisa10g0291 368 MobiDBLite consensus disorder prediction 176 196 - -
Bisa10g0291 368 SMART sant 101 149 IPR001005 -
Bisa10g0291 368 SMART sant 49 98 IPR001005 -
Bisa10g0291 368 FunFam MYB transcription factor 50 101 - -
Bisa10g0291 368 Pfam Myb-like DNA-binding domain 53 110 - -
Bisa10g0291 368 MobiDBLite consensus disorder prediction 180 195 - -
Bisa10g0291 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 100 IPR017930 -
Bisa10g0291 368 MobiDBLite consensus disorder prediction 1 53 - -
Bisa10g0291 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 151 IPR017930 -
Bisa10g0291 368 CDD SANT 104 147 IPR001005 -
Bisa10g0291 368 Gene3D - 49 101 - -
Bisa10g0291 368 SUPERFAMILY Homeodomain-like 47 143 IPR009057 -
Bisa10g0291 368 PANTHER MYB PROTEIN-RELATED 50 191 - -
Bisa10g0291 368 CDD SANT 52 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0291 Bisa-ChrBisa10 5654099 5657783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0291 39 368 MYB Transcription Factor Family AT3G09230 50.294 1.26e-105 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa10g0291 Myb_DNA-bind_6 4.5e-16 CL0123