Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0277 ATGCTTCAGATTCGGCTTAGTAAGTTGCCAGCCTCAGAAAGTTCAGCAGCGGCGAGGCCCTCACCTGTTGAGACTGTTATTGCATGCCCAGACCATCTAGTCCTTGCTGATCTTCCTGTGGCAAAGGGCATAGGTGCAGCTACTACCACTTCCATTGTTAAGACTTCAGGCCGGAGGTCCCGCCGCCAGCTTGGGGAGCGAGTTCATTTCTGTGTTCGTTGTGATTTCCCAATAGCTATCTATGGACGGCTGAGCCCTTGTGAGCATGCCTTCTGTCTTGATTGTGCTAGAAGTGACTCAACGTGCTACCTGTGTGATGAACGAATCCAGAAGATACAGACAATCAAAATGATGGAAGGAATCTATATTTGTGCTGCTCCTCATTGTCTCAAGTCTTTTCTGAAGAAGGCTGAATTTGAATCTCACATTCAAGACAAGCACGCTGACCTTCTCCGGTCCAACGCAGATAGAGAAGATGGAAATGAGTCAGAGGCACAGAGTGTTAGGCAACCTACAGCATCAGACTCCTCTGCCCGAGGTCCCCAGAGGCCAGTTTTTTCTCCTGGTGCAAATTCACAGTCCCATGAATGGGAAGACAAAAGTCGAAGACAGTCAATGAGAGAGCAGCCAACCCCTCCAAGACCGGTTCTACAGCCAAAGCCACCATTTTACGGTCAAGCACAAAATCCTGCTTCAGATCCCCAATCCGGCCCTCCTGCAGCTATTCAACAGGGCTTCCATCCTCAAAGTTTTGATATGCAGCGTCCCCAACGTGAACACTTTGTTGAGAAACAGCAAGGAGTTGCTCCGGAGGCCCAGTTTCCCGATTATCCGCCCATGCATCCTGCCCAGCCACCCAATTTTGCTGCGCCAGTTAATCCAAATCCAATGCTGAATCCTCCTATGCCATTTGGTTATCCCCCATACCCACATGAGGGAGTTCAACCATTTTATGGTGCTCCCTATGATATGCCTAGGCAGGACTCGTCTGAAATAGGTGCAGAACAGGGTTCATTATTGGGTTACCCACCTGGTCCAGGAAGTGGCCCAAATTTTCCAGCAAATTACCCTCAACCGTTGAATGCAAGAATGGCTGGTGTGCCTTTTGATCAAGCTCAGGGTGGTATGGTTATGGATCGAAGGGATGCCAAAGGTATATAG 1161 0.4927 MLQIRLSKLPASESSAAARPSPVETVIACPDHLVLADLPVAKGIGAATTTSIVKTSGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSTCYLCDERIQKIQTIKMMEGIYICAAPHCLKSFLKKAEFESHIQDKHADLLRSNADREDGNESEAQSVRQPTASDSSARGPQRPVFSPGANSQSHEWEDKSRRQSMREQPTPPRPVLQPKPPFYGQAQNPASDPQSGPPAAIQQGFHPQSFDMQRPQREHFVEKQQGVAPEAQFPDYPPMHPAQPPNFAAPVNPNPMLNPPMPFGYPPYPHEGVQPFYGAPYDMPRQDSSEIGAEQGSLLGYPPGPGSGPNFPANYPQPLNARMAGVPFDQAQGGMVMDRRDAKGI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0277 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 120 IPR013083 -
Bisa10g0277 386 FunFam E3 ubiquitin-protein ligase Hakai 68 122 - -
Bisa10g0277 386 MobiDBLite consensus disorder prediction 275 292 - -
Bisa10g0277 386 ProSitePatterns Zinc finger RING-type signature. 87 96 IPR017907 -
Bisa10g0277 386 MobiDBLite consensus disorder prediction 335 356 - -
Bisa10g0277 386 ProSiteProfiles Zinc finger C2H2 type domain profile. 122 148 IPR013087 -
Bisa10g0277 386 MobiDBLite consensus disorder prediction 165 194 - -
Bisa10g0277 386 MobiDBLite consensus disorder prediction 271 292 - -
Bisa10g0277 386 ProSitePatterns Zinc finger C2H2 type domain signature. 124 147 IPR013087 -
Bisa10g0277 386 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 385 IPR040383 GO:0016567|GO:0061630
Bisa10g0277 386 CDD RING-HC_HAKAI-like 69 118 IPR040380 -
Bisa10g0277 386 MobiDBLite consensus disorder prediction 155 245 - -
Bisa10g0277 386 MobiDBLite consensus disorder prediction 228 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0277 Bisa-ChrBisa10 5300411 5302995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0277 1 359 C2H2 Transcription Factor Family AT5G01160 51.771 7.94e-113 332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0277 10 5300411 5302995 Bisa10g0277 10 5300411 5302995 ECH