Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0273 ATGGCTTCTGCATCATCTCACTGTGCAGTAGCAGTAGCATTGGGTTTGAAAAGAAGGGATTTCACAGTTGTATCTAAGCTCAGGAATGTGAAGAAGTATGAATATCCATGGCCTGATAACCCTAACCCTAATGTGAAAGGTGGAGTGTTGAGTCATCTCTCATATTTTAAGCCATTGAAGGAGAAACAGAAGCCAGTCACTTTGGATTTTGAGAAACCCCTTCTTGAACTGGAAAAGAAGATTATTGATGTGAGGAAGATGGCTGAAGAAACTGGTATGGACTTCAGTGATCAGATTATCACATTAGAGACCAAGTACCAGCAGGCTTTAGAGGATTTACATACACATCTGACTCCTGCACAGCGTTCCAGCATTGCAAGGCATCCTAATAGGCCTACTTTCCTTGATCATTTTGTGGAACTCCATGGTGATCGAGCAGGCTACGATGACCCAGCTATTGTTACTGGTTTAGGGACCATAGATGGAAGAAGATACATGTTCATCGGTCACCAGAAGGGTCGAAATACCAAAGAAAACATTCACCGTAACTTTGGGATGCCAACACCCCATGGTTACAGGAAGGCTCTTCGCATGTTTCATTATGCTGATCATCATGGGTTCCCCATTATTACTTTCTTGGACACTCCTGGGGCATATCCTGACCTTAAATCAGAGGAACTAGGGCAAGGTGAAGCCATTGCACAAAATGTGAGGACCATGTTTGGTCTCAAGGTACCAATTGTGTCCATAGTTATTGGGGAGGGAGGCTCTGGTGGTGCACTTGCCATTGGTTGTGCTAATAAATTACTTATGCTTGAAAATGCAGTCTTCTATGTAGCCAGTCCAGAGGCATGTGCAGCCATTTTGTGGAAGAGTGCTAAAGCTTCTCCAAAGGCAACTGAGAAGCTAAAGTTTACAGCCTCTGACTTGTGCAAATTGCAAATCATAGATGGTGTTATCCCTGAGCCACTTGGTGGTGCACATGCAGATCCATCTTGGGCGTCACAGCAGATAAAAGTAGCAATCAATGAAGCCATGGATGAGCTCATTCAAATGAAAACAGAGGAGCTACTAAAGCATCGTATGCTTAAGTACCGAAAAATTGGTGAGTTCCAAGAAGGAATCCCTATAGATCCTAAGAGGAAAATCAACATGAAGAAGAGAGAATTATCAAAAACAAAGTTTGTCTCAAATAGGGATAAGAGGGCTACCATGTTGAAGGAAGAATTCACGGCAACTTTTGAAGATGTAATTAAAAACCCTAATATAAAGCAAAAGTATGAGTCCTTGAAGGCTGAAGTTGAAGGTTCTGATGTATCCTCAGCAAGTGATTTAGATGTTGAATTGAAGAGGAAGATGAAAGAGTTCAAGGAAGAGCTAGTGTTGCAACTAGTTCATGCTTTGAGGTCAAAGGGATTAGACGTTGATGTTGCGAAAGCAAAGCCACGTGGCAGCATGGGGATAGAAGAATTGAACAGTGATATCAAGAAGAGAATTGAAATTGCACTAAGTTCATCATCAGATCTTAAGAGCAAGATAGAGCAATTGAAAATAGAGGTTGGGAAGGTAGGGAATTCACCTGATTTGGCATCAAAAAGTAAAATTTGTGGTTTGGAGCTACAAATTAAACAAATTAAGAAGAGCCTTGTAGAGGCTATTGATTCTTCTTCTGGCTTGAAAGAGAAGCATGAGAATTTGATGTCTAGGGTTTCTAGGAAGGGTGAATTATCCGCAGCATCAAATGGAATCGAAGAAGATAGTAATTTTGTCTACTTTGCCCACCTGATGCTTGCACGAAAAGATGCTGAGCTAATTGTGGGCTGTAAATATTGTTCTGTGGCGAATGCTGTTTGGTGCTTAATGATAGTTGCTATGGACTTGAATGCCTCACCGGTTCCAGAGGAAGATGAGGACCCTTTTGAGGGGCATGTAGAAGAGTTCACTGCTCAAGAGGAACGAGTAGAAACTGCAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAAAGACGGTTGAAAAGAGAACGTCCAGATGACAGACCTGTGCATGTATCTCCATCACCTGGTTATGATCAACTCTTTCATACAAAGTTCCTTAAATCATATGATAAAAATAGGCTTCCACCAGGGTGGTTGGATTGCCCTTCGGTTGGTCAGGAAATTTTTGGCATGATACCTTCTAAAGTTCCACTTGGTGAATCGTTCAATGACTGTGTTGTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAAAGGGTTTTAGGGAGAAAACTTGGTTTGGTGATTGATTTGACAAATACTTCTCGATACTATCCAGTGTCAGATTTGAAGAAAGAGGGTATCAAGCACGTGAAGATACAATGCAAGGGGCGTGGTTCTGTACCTGATAATTTTTCCGTGAATCAGTTTGTCCATGAGGTTACACAATTTCTGTCACGTCAAAAACACTCAAAGAAATATATACTCGTCCACTGTACACATGGGCATAATCGTACAGGATACATGATCATCCATTATCTTATGCGTGTCATGTCAATGTCTGTCACTCAGGCAATAAAAATATTTTCTGAAGCACGCCCTCCTGGAATCTACAAACCTGACTACATTGATGCATTATACACATTTTATCATGAAAAAAAGCCTGAAATGGTGGTTTGTCCTCCTACTCCAGAGTGGAAGAGATCTTCCGAATTTGATCTTAATGGTGAAGCAGTGCCAGATGATGATGATGATGGGATACCAGACCCTCCTTTGGATTGCTCTCAGGAGAACCATGAGATAGATGCAATAATGACAAATGATGATATCTTGGGGGATGAGATACCGAGTGATCAGCAAGATTCATTCCGACAGTTCTGTTATCAGTCACTCAAATTGGGTGCTGGGGCTAGAGGACATACACAATTTCCAGGGTCACACCCAGTTTCTCTGGACAGGGACAATTTGCAGTTGTTACGGCAGCGTTATTATTATGCAACATGGAAAGCCGATGGAACGCGATATATGATGCTGATAACTATGGATGGATGTTACTTAATTGATAGACATTTCAATTTTCGAAGGGTTCAAATGAGATTTCCATGCAGGGGCACAAATGATGTTCTGGCTGAGAAGACCCATCACTACACATTACTTGATGGGGAGATGATCATTGATACATTGCCTGATTCACAGAAGCAGGAGCGGAGATATCTTATATATGATCTGATAGCAGTTAACCAAGCATCAGTAATAGAGCGACCCTTTTATGAAAGATGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTTCGAGCGGCATAATATATACCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTACGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTGACAGAATTCATCCCAAAACTCTCGCATGATGCTGATGGCCTCATATTTCAGGGTTGGGATGATCCTTATGTACCACGTACTCATGAAGGCCTCTTAAAGTGGAAATATCGTCACATGATTTCAGTTGATTTTCTCTTTGAGATTGATGATGGTTGTCAGAAACTTTTTCTCTATGGACGAGGAAAGAGGAAACTCATGGAAGGGAACAGGGTCTCATTCAGAGATGGTTCAGATCCCTCACTCTATTCTGGAAAGATCATAGAGTGTTCTTGGGATTCCGATGAACAGGAATGGATATACTTGCGAGTGAGAACAGATAAATCAACACCAAATGACTATAATACTTTTAAGAAGGTGATGCGAAGTATAAAAGACAATATTACAGAGGATGTTTTGTTGAATGAGATATCCGAGATTATTCGCCTTCCCATGTATGCTGACAGGATAAGAATTGATAGTAAAGCACACCATCATAATAGCGCGGCACGGAGAAGGTAA 3915 0.4123 MASASSHCAVAVALGLKRRDFTVVSKLRNVKKYEYPWPDNPNPNVKGGVLSHLSYFKPLKEKQKPVTLDFEKPLLELEKKIIDVRKMAEETGMDFSDQIITLETKYQQALEDLHTHLTPAQRSSIARHPNRPTFLDHFVELHGDRAGYDDPAIVTGLGTIDGRRYMFIGHQKGRNTKENIHRNFGMPTPHGYRKALRMFHYADHHGFPIITFLDTPGAYPDLKSEELGQGEAIAQNVRTMFGLKVPIVSIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKSAKASPKATEKLKFTASDLCKLQIIDGVIPEPLGGAHADPSWASQQIKVAINEAMDELIQMKTEELLKHRMLKYRKIGEFQEGIPIDPKRKINMKKRELSKTKFVSNRDKRATMLKEEFTATFEDVIKNPNIKQKYESLKAEVEGSDVSSASDLDVELKRKMKEFKEELVLQLVHALRSKGLDVDVAKAKPRGSMGIEELNSDIKKRIEIALSSSSDLKSKIEQLKIEVGKVGNSPDLASKSKICGLELQIKQIKKSLVEAIDSSSGLKEKHENLMSRVSRKGELSAASNGIEEDSNFVYFAHLMLARKDAELIVGCKYCSVANAVWCLMIVAMDLNASPVPEEDEDPFEGHVEEFTAQEERVETAVDIARREREERKRRLKRERPDDRPVHVSPSPGYDQLFHTKFLKSYDKNRLPPGWLDCPSVGQEIFGMIPSKVPLGESFNDCVVPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNFSVNQFVHEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRVMSMSVTQAIKIFSEARPPGIYKPDYIDALYTFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGIPDPPLDCSQENHEIDAIMTNDDILGDEIPSDQQDSFRQFCYQSLKLGAGARGHTQFPGSHPVSLDRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRHFNFRRVQMRFPCRGTNDVLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDLIAVNQASVIERPFYERWKMLEKEVIEPRNFERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLTEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYRHMISVDFLFEIDDGCQKLFLYGRGKRKLMEGNRVSFRDGSDPSLYSGKIIECSWDSDEQEWIYLRVRTDKSTPNDYNTFKKVMRSIKDNITEDVLLNEISEIIRLPMYADRIRIDSKAHHHNSAARRR 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0273 1304 Coils Coil 644 664 - -
Bisa10g0273 1304 PANTHER ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT ALPHA 16 393 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 SMART dsp_5 741 881 IPR020422 GO:0006470|GO:0008138
Bisa10g0273 1304 Gene3D - 55 373 - -
Bisa10g0273 1304 SUPERFAMILY ClpP/crotonase 67 371 IPR029045 -
Bisa10g0273 1304 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 804 873 IPR000387 GO:0016311|GO:0016791
Bisa10g0273 1304 MobiDBLite consensus disorder prediction 665 686 - -
Bisa10g0273 1304 Pfam mRNA capping enzyme, catalytic domain 976 1174 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bisa10g0273 1304 FunFam mRNA-capping enzyme 1196 1289 - -
Bisa10g0273 1304 Gene3D Protein tyrosine phosphatase superfamily 687 902 IPR029021 -
Bisa10g0273 1304 ProSiteProfiles Dual specificity protein phosphatase domain profile. 736 885 IPR020422 GO:0006470|GO:0008138
Bisa10g0273 1304 CDD Adenylation_mRNA_capping 965 1175 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bisa10g0273 1304 PRINTS Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 252 261 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 PRINTS Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 224 237 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 PRINTS Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 143 154 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 PRINTS Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 186 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 PRINTS Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 189 205 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 PRINTS Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 208 221 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 ProSitePatterns Tyrosine specific protein phosphatases active site. 826 836 IPR016130 GO:0016311|GO:0016791
Bisa10g0273 1304 Gene3D - 1214 1281 IPR012340 -
Bisa10g0273 1304 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 101 348 IPR011763 GO:0016874
Bisa10g0273 1304 CDD RNA_5'-triphosphatase 710 876 - -
Bisa10g0273 1304 FunFam mRNA capping enzyme, putative 935 1172 - -
Bisa10g0273 1304 ProSiteProfiles ATP-dependent DNA ligase family profile. 1058 1202 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bisa10g0273 1304 Gene3D DNA ligase/mRNA capping enzyme 935 1174 - -
Bisa10g0273 1304 FunFam mRNA capping enzyme family protein 703 918 - -
Bisa10g0273 1304 Pfam mRNA capping enzyme, C-terminal domain 1219 1272 IPR013846 -
Bisa10g0273 1304 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 707 896 IPR029021 -
Bisa10g0273 1304 Pfam Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 68 203 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 Pfam Dual specificity phosphatase, catalytic domain 759 879 IPR000340 GO:0008138|GO:0016311
Bisa10g0273 1304 SUPERFAMILY Nucleic acid-binding proteins 1177 1288 IPR012340 -
Bisa10g0273 1304 MobiDBLite consensus disorder prediction 665 682 - -
Bisa10g0273 1304 NCBIfam acetyl-CoA carboxylase carboxyl transferase subunit alpha 66 373 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 Hamap Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 67 371 IPR001095 GO:0003989|GO:0006633|GO:0009317|GO:0016743
Bisa10g0273 1304 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 936 1175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0273 Bisa-ChrBisa10 5246694 5278791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0273 621 1304 Protein tyrosine phosphatase (PTP) family AT3G09100 68.850 0.0 956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0273 10 5246694 5278791 Bisa10g0273 10 5246694 5278791 ECH