Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0265 ATGAACAGGGGAATTGAAGTTCTCTCTCCATCCTCTTATATTCAAAACTCAAATTGGCTATTCCAAGAAAGCAAAGGAACAAGATGGACTCCGGAAGAGAACAAGCGGTTTGAGAATGCTTTGGCTCTGTATGATAAGGATACTCCAGATCGTTGGGCTAAGGTGGCAGCTCTGATTCCTGGGAAAACAGTGGGTGATGTGATTAAACAGTACAGAGATTTGGAAGAAGATGTTAGTGTCATTGAGGCAGGGCTGATCCCAGTTCATGGGTATAATGATAACAGTTCTTTCTCGTTGGAGTGGGTCAATAACCATGGCTTTGAGGATTTTAAGCCGTTCTATACTGCTTGTGGGAAAAGGGGCTCTTCCACAAGGCCATCTGAGCAGGAAAGGAAGAAAGGTGTGCCATGGACTGAGGAAGAGCACAGGCAATTTCTGATGGGTCTGAAGAAGTATGGTAAAGGGGACTGGAGAAACATATCCCGTAATTTTGTGACCACAAGAACACCAACTCAGGTTGCTAGTCATGCTCAGAAGTATTTCATCAGGCAGCTTACAGGAGGCAAAGATAAGAGGAGATCCAGCATCCATGACATCACAATGGTGAATCTCCCAGAAACTAAATCTCCTCCTTCATCAGACAGTCACAGACCTTCTTCTTCTCCTGATCATCACTCAGTGAAACTAATGAATCCACAGAAGAATCCTAACTTCTCAACCATAGTTAAGCAGGAATATGAATCAAAATTACCCTATGAAGCCATGCCAATGGTGTTCAATTCAACAAAAGGGAACATGTTCATGGGGCCATTTCGTGGGATTTCTTCTGTTGGATCTGGAGGTTCTCTTCATGGATGTCAATTTGGATCATATGATCCCATTTTTCAAGTGCAATCTATGCAATACCATCAGTGA 915 0.4306 MNRGIEVLSPSSYIQNSNWLFQESKGTRWTPEENKRFENALALYDKDTPDRWAKVAALIPGKTVGDVIKQYRDLEEDVSVIEAGLIPVHGYNDNSSFSLEWVNNHGFEDFKPFYTACGKRGSSTRPSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLPETKSPPSSDSHRPSSSPDHHSVKLMNPQKNPNFSTIVKQEYESKLPYEAMPMVFNSTKGNMFMGPFRGISSVGSGGSLHGCQFGSYDPIFQVQSMQYHQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0265 304 FunFam Transcription factor SRM1 21 88 - -
Bisa10g0265 304 MobiDBLite consensus disorder prediction 185 235 - -
Bisa10g0265 304 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Bisa10g0265 304 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Bisa10g0265 304 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Bisa10g0265 304 SMART sant 25 77 IPR001005 -
Bisa10g0265 304 SMART sant 133 183 IPR001005 -
Bisa10g0265 304 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Bisa10g0265 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Bisa10g0265 304 CDD SANT 28 74 IPR001005 -
Bisa10g0265 304 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 184 IPR006447 GO:0003677
Bisa10g0265 304 FunFam transcription factor MYB1R1 135 186 - -
Bisa10g0265 304 CDD SANT 136 181 IPR001005 -
Bisa10g0265 304 MobiDBLite consensus disorder prediction 200 217 - -
Bisa10g0265 304 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 237 IPR043363 -
Bisa10g0265 304 Pfam Myb-like DNA-binding domain 28 74 IPR001005 -
Bisa10g0265 304 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Bisa10g0265 304 SUPERFAMILY Homeodomain-like 130 184 IPR009057 -
Bisa10g0265 304 Gene3D - 135 185 - -
Bisa10g0265 304 Gene3D - 21 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0265 Bisa-ChrBisa10 5028109 5029566 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa10g0265 Myb_DNA-binding 2.3e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0265 10 5028109 5029566 Bisa10g0265 10 5028109 5029566 ECH
Bisa10g0265 10 5028109 5029566 Bisa05g1601 05 29322346 29323942 ECH
Bisa05g1601 05 29322346 29323942 Bisa10g0265 10 5028109 5029566 ECH