Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0260 ATGTTTGCGACTCACCTCCTCTTTACCTTTTCTTTACTTGTTGTCTCTCCTACAACTGGATTTTATTCATTGTTTATAGAACCAGAGAGGAAGCCAACCAGAAAGGAAGGGTTTCAGGAGGCGAGAGAGAAATCTGAGATTTTTGAGATGGACGTGATAAAATCTCAGCAAATATCGTCGAGGCCCATCGAGAAGGTCATAGTGCATCCGCTCGTTCTTCTCAGCATCGTCGATAACTACAATCGAGTCGCCAAGGACACTCGCAAGCGGGTCGTCGGAGTCTTGCTCGGCAGTTCCTTTAAGGGCACCGTCGATGTGAGCAACAGCTACGCAGTGCCTTTTGAGGAAGATGACAAGGACCCCAGCATCTGGTTCCTTGACCACAATTACCATGAGTCTATGTTTTCTATGTTCAAGAGAATAAATGCTAAGGAGCACGTTGTGGGATGGTACAGCACAGGCCCAAAACTACGTGAGAATGATCTTGATATTCACAGATTATTCCACAACTATGTTCCAAATCCAGTGCTGGTCATCATTGATGTCCAGCCTAAGGAGCTGGGGATACCTACCAAGGCTTATTATGATGTTGAAGAAGTAAAGGAGAATGCTACACAGAAAAGCCAGAAGGTTTTTGTTCATGTGCCTTCGGAAATTGCTGCACATGAGGTTGAGGAAATTGGAGTAGAACACTTGTTGAGGGATGTTAAAGATACAACCATTAGTACGCTTGCCACTGAGGTTTCTGGTAAACTTACAGCACTAAAGGGTTTAGATGCAAGATTAAAAGAGATACGATGTTACCTTGATCTGGTGATTGATGGAAAGCTTCCATTAAACCATGAGATACTATACCATCTGCAGGATGTGTTCAACCTCCTCCCAAATCTCAATGTGTCAGAATTAATCAAGGCCTTTGCAGTAAAAACAAATGACATGATGCTTGTCATTTATCTTTCTTCTCTGATCCGAAGTGTCATTGCACTTCACAACTTGATAAACAACAAGATGCTGAACAAAGAGCATGAGAAAGCTGAAGATGCAAAGCCAGTCTCAGTCCCTGCTTCGAGTGGAAGCTGA 1080 0.4333 MFATHLLFTFSLLVVSPTTGFYSLFIEPERKPTRKEGFQEAREKSEIFEMDVIKSQQISSRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRCYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVSELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAKPVSVPASSGS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0260 359 CDD MPN_RPN7_8 64 344 IPR033858 GO:0005838
Bisa10g0260 359 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 62 342 - -
Bisa10g0260 359 SMART pad1_6 65 199 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bisa10g0260 359 FunFam 26S proteasome non-ATPase regulatory subunit 7 58 243 - -
Bisa10g0260 359 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 64 173 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bisa10g0260 359 Pfam Maintenance of mitochondrial structure and function 223 334 IPR024969 -
Bisa10g0260 359 Gene3D Cytidine Deaminase, domain 2 58 243 - -
Bisa10g0260 359 ProSiteProfiles MPN domain profile. 66 200 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0260 Bisa-ChrBisa10 4866992 4876239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0260 68 297 Eukaryotic Initiation Factors Gene Family AT2G39990 29.487 7.36e-27 106