Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0256 ATGAGCCAGAGTGCAAAGTGCTCCAAGATCCTAGCTTTACAAATCCTTAGTGGATTGTTTCTTGTGAACATGAGCTCAAGATTTCACTATGCAATAGCAACCCTACTGGGAAATGAAACTGAATTTCAAGCTTTACTTGACTTCAAGAGTCGGATAGCTCAAGATCCATTCAAAACCATGAATTTGTGGAACAATTCCATCCATCACTGCAAGTGGGTAGGAATCACCTGCAGCAGTTCTGGAAGGGTGGTGAAATTGAGCCTCGTAGATCAGAGATTGGCTGGCACTATTCCACCGTCTATAGGTAACCTCACATTCCTCAGAAAACTCAACCTGAATGGTAATGGCTTCCAAGGTGAATTCCCTCATGAAGTGGGACGTCTACTATACCTTCAACATCTAAACATAAGCTATAATTACTTTGGTGGGATTATTTTAAGCAATCTAAGTCATTGCAAAGAATTGAGAATATTATCTGTAAGTCATAACAATTTTAAAGGAACAATCCCAACTTGGATAGGGAACTTTTCTTCCTTGTCTCGTATTTACTTTGGGGTGAACAACTTGCATGGAAATATACCAGATGAGGTTGGCCAATTATCGGGCTTGACAGTTCTTGAACTAAATGGAAATTACCTATATGGTACAGTCCCTTATTCAATTTACAACATTTCCTCCATATTTTACTTCCATATTTCTCAAAACCAACTGTGGGGTAGTTTACCACCTAATGTTGGCTTTACACTTCCTAATCTCAAAGTTTTTGCTGGGTCAGTCAATAATTTCACAGGAACTATTCCACCATCATTGTTAAATGCTTCGGGGCTAGAGCTTCTTGACTTTGCCAATAATTCTCTCACTGGAAAATTGCCTGAGAACATTGGAATCTTGAAACACTTAACTCGGCTTAACTTTGATGATAATAGACTTGGAACAAGGGAAGCTGATGGCCTTAGCTTTCTAGATTCGTTGGTTAACTGTACTGCTCTCAAAGTTTTTGGCCTTGCTGGAAATGTTTTTGGAGGACACCTTCCTAGCTCAATTGCTAACTTATCAAGCCAATTAACAAGGTTTACGATAGGTAGCAACGCATTATATGGGAGCATCCCCATTGGAATTGGTAGACTTGTTAACTTGGAAATCCTGGGATTTGAAGTAAACTACCTGAGTGGTACTGTGCCTAATGACATTGGTAAACTCAAAAATTTAGGTGGTTTGTATTTGAATGGGAACAACTTTTCGGGAACAATCCCTTCCTCTCTAGGAAACTTAACATCATTATCAATGCTCTTCATGGAGGATAACAATTTTGAGGGCCATATACCTTCAAGTTTACGAAATTGTCAGCAGCTGCAGCTTTGCGGTGGTGCTCCAGAGCTTAGCTTACCTACTTGCACTGCCAATAAAGACTCTTCGTCTAGAAGGTTTCTTGCCCTCAAGGTGGTTATCCCTCTTGCTATTACTCTTATATCATGCTTTCTTGCATACTTTCTCATGGTAAAAAGAGCAAGAAAGAGATCAGAAACAAGAGCAATTACTATGAAGGATTTGGGTTCAGAATTTTCTTACTTAGAACTAGCCAGATGCACTGCAACTCTTCTATATGAAGAATCTAGCAAGTCTTCCACTTCTAAACAATCAACAATATCAGAGGTCTTAAAGGGTTCTATTGGGTACATTCCACCAGAGTATGGGATGGGTGGTCAACCTTCTACACTTGGAGATATCTACAGCTACGGGATACTATTATTGGAGATTTTCACAGGGAAAAGGCCAACGAGTGAGGAATTTGAAGATGGGATGGGAATTCACCAATTTGCAGCAATGGCTTTACCGAATCATGTCATGGATGTTGTTGATCTTTCGATGCTATCAGATGAGAAATTTGAAGATGAAGATAAAGAAATATACTTAGAGGAGAATGCAATAAGGAAGGGGAAAAGAAGCAAAGCAAATGAAAGACAAATGAAATTGGAGGATTGCTTGGCTTCGTTGATGCAAATTGGAGTCTCATGCTCTGCAACTTCACCAACGGATCGGCTATCCATGACTCTGGTTGGCAACAAGCTGAATGCAATTAAGAACCTTTACGTTAGAAATTAA 2103 0.3956 MSQSAKCSKILALQILSGLFLVNMSSRFHYAIATLLGNETEFQALLDFKSRIAQDPFKTMNLWNNSIHHCKWVGITCSSSGRVVKLSLVDQRLAGTIPPSIGNLTFLRKLNLNGNGFQGEFPHEVGRLLYLQHLNISYNYFGGIILSNLSHCKELRILSVSHNNFKGTIPTWIGNFSSLSRIYFGVNNLHGNIPDEVGQLSGLTVLELNGNYLYGTVPYSIYNISSIFYFHISQNQLWGSLPPNVGFTLPNLKVFAGSVNNFTGTIPPSLLNASGLELLDFANNSLTGKLPENIGILKHLTRLNFDDNRLGTREADGLSFLDSLVNCTALKVFGLAGNVFGGHLPSSIANLSSQLTRFTIGSNALYGSIPIGIGRLVNLEILGFEVNYLSGTVPNDIGKLKNLGGLYLNGNNFSGTIPSSLGNLTSLSMLFMEDNNFEGHIPSSLRNCQQLQLCGGAPELSLPTCTANKDSSSRRFLALKVVIPLAITLISCFLAYFLMVKRARKRSETRAITMKDLGSEFSYLELARCTATLLYEESSKSSTSKQSTISEVLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTSEEFEDGMGIHQFAAMALPNHVMDVVDLSMLSDEKFEDEDKEIYLEENAIRKGKRSKANERQMKLEDCLASLMQIGVSCSATSPTDRLSMTLVGNKLNAIKNLYVRN 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0256 700 Gene3D Ribonuclease Inhibitor 317 479 IPR032675 -
Bisa10g0256 700 Pfam Leucine Rich Repeat 131 152 IPR001611 GO:0005515
Bisa10g0256 700 Gene3D Transferase(Phosphotransferase) domain 1 525 698 - -
Bisa10g0256 700 SUPERFAMILY L domain-like 39 442 - -
Bisa10g0256 700 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 370 455 - -
Bisa10g0256 700 Pfam Protein tyrosine and serine/threonine kinase 546 686 IPR001245 GO:0004672|GO:0006468
Bisa10g0256 700 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Bisa10g0256 700 PANTHER UNNAMED PRODUCT 516 594 - -
Bisa10g0256 700 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 76 326 - -
Bisa10g0256 700 Gene3D Ribonuclease Inhibitor 37 316 IPR032675 -
Bisa10g0256 700 SUPERFAMILY L domain-like 318 452 - -
Bisa10g0256 700 SUPERFAMILY Protein kinase-like (PK-like) 549 687 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0256 Bisa-ChrBisa10 4768773 4771892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0256 531 697 Receptor kinase-like Gene Family AT5G20480 33.533 7.37e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa10g0256 PK_Tyr_Ser-Thr 1.5e-05 CL0016