Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0251 ATGAGCCAGAGTGCAAACTGCTCCAAGATCCTAGCTTTACAAATCCTCAGTGGATTGCTTCTTTTGTGCATGAGCTCAGGACTTCACTATGCAATAGCAAACCCACCAGGAAATGAAACTGATCTTCAAGCTTTACTTGACTTCAAGAGTCGGATAGCTCAAGATCCATTCAAAACCATGAGTTTGTGGAACAATTCCATCCATCACTGCAAATGGGTAGGAATCACCTGCAGCAACTCTAGAAGGGTGGTGAAATTGAGCCTCGCAGATCAGAGATTGGCTGGTACTATTCCACCATCTATAGGTAACCTCACATTCCTCAGAGAACTCAACTTGAGAAGAAATGGCTTCCATGGTGAATTTCCTCATGAAGTGGGACGTCTACTGTACATTCAACATCTAAACGTAAGCTATAATTACTTTGGTGGGAGTATTTTTAGCAATCTAAGTCATTGCAAAAAAATGAAAATATTATCTGTAGGTCACAACAATTTTACAGGAACAATCCCAACGTGGATAGGGAACTTTTCTTCCTTGTCTCTTATTTCCCTTCAAGTGAACAACTTGCATGGAAGCATACCAGATGAGGTTGGCCAACTATCAGGTTTAACATATCTTGACCTATATGGAAATTACCTATCTGGAACAGTCCCTTCTTCAATATACAACATTTCTTCTATATTTTACTTTGGTGTTGCTCAAAACCATCTATGGGGTAGTTTACCATCTGATGTTGGCTCTACACTTCCTAATCTCAAAACTTTTGCTGGGGGAGTCAATAATTTCACAGGAACTATTCCACCATCATTGTTAAATGCTTCGGGGCTAGAACTTCTCGACTTTGCCAATAATGCTCTCACTGGAAAATTGCCGAAGAACATTGGAATCTTGCAACATTTAACTTGGCTTAACTTTGATGATAATAGACTTGGAACAAAGGAAGCTGATGGCCTTAGCTTTCTAGATTCGTTGGTTAACTGTACTGCTCTCAAAGTTTTTAATCTTGCTAGAAATGTTTATGGAGGACAACTTCCCAGCTCCATTGCTAACTTATCAAGCCAATTAAGAATATTCAGAGTTGGTCAAAACGCATTATATGGGAGCATCCCCATTGGAATTGGCGCACTTGCTAACTTGGAAATCCTAGGATTTGAAGGAAACTATCTGAGTGGTATTGTGCCTAATGATATTGGTAAACTCAAAAATTTAGGTGGTTTGTATTTGAATGAGAACAAGCTTTCGGGAACAATCCCTTCCTCTCTAGGAAACTTAACATCATTATACAGGCTCTTCATGGAGGATAACAATTTTGAGGACAATATACCTTCAAGTTTAGGAAAATGTCAGCAGCTGCAGTCAACAATATCAACTGTCTTAAAGGGTTCTATAGGGTACATTCCACCTGAGTATGGGATGGGTGGCCAACCTTCTACACTGGGAGATATCTACAGCTACGGGATACTATTACTGGAGATTTTCACAGGGAAAAGGCCAACGAGTGAGGAATTTGAAGATGGGATGGGAATTCACCAATTTGCGGCAATGGCTTTACCAAATCATGTCATGGATGTTGTTGATCTTTCAATGCTATCAGATGAGGAATTTGAAGATGAAGATAAAGAAACCATGTAG 1632 0.3971 MSQSANCSKILALQILSGLLLLCMSSGLHYAIANPPGNETDLQALLDFKSRIAQDPFKTMSLWNNSIHHCKWVGITCSNSRRVVKLSLADQRLAGTIPPSIGNLTFLRELNLRRNGFHGEFPHEVGRLLYIQHLNVSYNYFGGSIFSNLSHCKKMKILSVGHNNFTGTIPTWIGNFSSLSLISLQVNNLHGSIPDEVGQLSGLTYLDLYGNYLSGTVPSSIYNISSIFYFGVAQNHLWGSLPSDVGSTLPNLKTFAGGVNNFTGTIPPSLLNASGLELLDFANNALTGKLPKNIGILQHLTWLNFDDNRLGTKEADGLSFLDSLVNCTALKVFNLARNVYGGQLPSSIANLSSQLRIFRVGQNALYGSIPIGIGALANLEILGFEGNYLSGIVPNDIGKLKNLGGLYLNENKLSGTIPSSLGNLTSLYRLFMEDNNFEDNIPSSLGKCQQLQSTISTVLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTSEEFEDGMGIHQFAAMALPNHVMDVVDLSMLSDEEFEDEDKETM 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0251 543 FunFam Leucine-rich repeat protein kinase family protein 173 316 - -
Bisa10g0251 543 FunFam Leucine-rich repeat receptor protein kinase EMS1 74 172 - -
Bisa10g0251 543 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Bisa10g0251 543 SUPERFAMILY RNI-like 235 452 - -
Bisa10g0251 543 SUPERFAMILY L domain-like 38 310 - -
Bisa10g0251 543 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 322 452 - -
Bisa10g0251 543 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 371 463 - -
Bisa10g0251 543 Gene3D Ribonuclease Inhibitor 151 247 IPR032675 -
Bisa10g0251 543 Gene3D Ribonuclease Inhibitor 320 418 IPR032675 -
Bisa10g0251 543 Gene3D Transferase(Phosphotransferase) domain 1 432 543 - -
Bisa10g0251 543 SUPERFAMILY Protein kinase-like (PK-like) 454 518 IPR011009 -
Bisa10g0251 543 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Bisa10g0251 543 Gene3D Ribonuclease Inhibitor 40 150 IPR032675 -
Bisa10g0251 543 Gene3D Ribonuclease Inhibitor 248 319 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0251 Bisa-ChrBisa10 4641227 4645870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0251 456 517 Receptor kinase-like Gene Family AT5G20480 54.839 8.15e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa10g0251 LRR_8 6.9e-07 CL0022