Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0249 ATGAGCCAGAGTGCGAACTGCTCCAAGATCCTAGCTTTACAAATCCTTAGTGGATTGCTTCTTTTGTGCATGAGCTCTAGACTTCACTATGCAATAGAAACCCCACGGGGAAATGAAACTGATCTTCAAGCTTTACTTGACTTCAAGAGTCGGATAGCTCAAGATCCATTCAAAATCATGAGTTTGTGGAACAATTCCATCCATCACTGCAAGTGGGTAGGAATCGCCTGCAGCAACTCTGGAAGGGTGGTGCAATTGAAGCTCGTAGCTCAGAGATTGGCTGGCACTATTCCACCATCTATAGGTAATCTCACATTCCTCAGAGAACTCAACCTTAGTCACGATAGCTTCCATGGTGAATTTCCTCATGAAGTGGGACGTCTACTATACCTTCAAGGTCTAATCATGGACTCTAATTACTTTAGTGGGAGTATTCCAAGTAATCTAAGTCACTGCAAAGAATTGAGATTATTATCTGCAGATCGCAACAATTTTACAGGAACAATCCCAAGGTGGATAGGGAACTTTTCTTCCATATATCGTATTGTCCTTGGAAATAACAACTTGCATGGAAGCATACCAGATGAGCTAGGCCAATTATCAGGTTTGACATTTCTTAGACTAAATGGGAATTACCTTTTCGGTACAATCCCTTCTTCAATTTACAACCTTTCCTCCATAGTCCATCTCAGTGTTACTCAAAATCATCTAGTAGGTAGTTTACCACTTGATCTTGGCTTTACACTTCCTAACCTCGAAGTATTTGCTGGGGGAATCAACAATTTCACAGGAATTTTTCCAACATCATTAATAAATGCTTCAAGGCTAATTTATTTTGACTTTGCTTATAATGCTCTCACTGGAAAATTGCCTAAGAACATTGGAATCTTGCAGCATTTAATTTGGCTTAGCATTGGTGGAAATAGACTTGGAACTGGGGAAGTTGATGACCTAAGCTTCCTTGATTCAATGGTTAACTGCTCTGGTCTTAGAATTTTAGACCTTCCTCAAAATCTTTTTGGAGGACTGCTACCCAACTCAATTGCTAACTTATCAAGCCAATTACGAATATTTGATTTAAGTGGCAACACATTATACGGGAGCCTCCCTATTGGAATTGGCAAACTTGTTAAGCTGGGAATCCTAGGGTTTGAAGGAAACTACCTCAGTGGTAGTGTGCCTGATGATCTAGGTAAACTCCAAAATTTGGATAGTTTGTATTTGAATAGTAACAACTTTTCAGGAACAATCCCTTCCTCTCTAGGAAACTTAACTTCATTATCAAAGCTCCACTTAGAGGACAACAATTTTGAGGGAAGTATACCTTCAAGTCTAGGAAAATGTCAACTGCAGGAAATATTTTTATTCAATAACAAGCTTAATGGCCCCCTACCCAAAGAAGTAATTGGTATTTCTTCGCTTTCAGTGAACTTTGATGTCTCTAACAATGCTTTGACAGGGTCTTTATCAGATGAAGTGGGCAATTTACACAATCTAGCAATATTAAACCTCTCGGAGAACAAGTTTTCTGGTGTTATTCCGCCTTCTCTTGCAAAATGTGTCAGCTTGGAGTGGATAAATTTGCAAGCCACCCTTCTATATAAAGAATCAAGCATGTCTTCCACTTCTACACAATCAACAATATCAGCTGTCTTAAAGGGTTCTATAGGGTACATTCCACCTGAGTATGGGATGGGTGGCCAACCTTCTACACTTGGAGATATCTACAGCTACGGGATACTATTACTAGAGATTTTCACAGGGAAAAGACCAACGAGTGAGGAATTTGAAAATGGGACGGGAATTCACCTATTTGCGGCAATGGCTTTACCGAATCACGTCATGGATGTTGTTGATCTTTCGATGCTATCAGATGAGGAATTTGAAGGCGAAGATAAAGAAATATACTTAGAGGAGAATGCAATAAGAAAGGGGAAAAGAAGCAAAGCAAATGAAAGACGAAGGAAATTGGAGGATTGCTTGGCTTCATTGATGCAAATTGGAGTCTCATGCTCTGCAACTTCGCCAACAGATCGGCTATCCATGACTGTGGTTGGCAACAAACTGAATGCAATTAAGAACCTTTACATCAGAAATTAA 2100 0.3971 MSQSANCSKILALQILSGLLLLCMSSRLHYAIETPRGNETDLQALLDFKSRIAQDPFKIMSLWNNSIHHCKWVGIACSNSGRVVQLKLVAQRLAGTIPPSIGNLTFLRELNLSHDSFHGEFPHEVGRLLYLQGLIMDSNYFSGSIPSNLSHCKELRLLSADRNNFTGTIPRWIGNFSSIYRIVLGNNNLHGSIPDELGQLSGLTFLRLNGNYLFGTIPSSIYNLSSIVHLSVTQNHLVGSLPLDLGFTLPNLEVFAGGINNFTGIFPTSLINASRLIYFDFAYNALTGKLPKNIGILQHLIWLSIGGNRLGTGEVDDLSFLDSMVNCSGLRILDLPQNLFGGLLPNSIANLSSQLRIFDLSGNTLYGSLPIGIGKLVKLGILGFEGNYLSGSVPDDLGKLQNLDSLYLNSNNFSGTIPSSLGNLTSLSKLHLEDNNFEGSIPSSLGKCQLQEIFLFNNKLNGPLPKEVIGISSLSVNFDVSNNALTGSLSDEVGNLHNLAILNLSENKFSGVIPPSLAKCVSLEWINLQATLLYKESSMSSTSTQSTISAVLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTSEEFENGTGIHLFAAMALPNHVMDVVDLSMLSDEEFEGEDKEIYLEENAIRKGKRSKANERRRKLEDCLASLMQIGVSCSATSPTDRLSMTVVGNKLNAIKNLYIRN 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0249 699 SUPERFAMILY L domain-like 38 310 - -
Bisa10g0249 699 SMART LRR_typ_2 400 423 IPR003591 -
Bisa10g0249 699 SMART LRR_typ_2 424 448 IPR003591 -
Bisa10g0249 699 SMART LRR_typ_2 200 224 IPR003591 -
Bisa10g0249 699 SMART LRR_typ_2 496 520 IPR003591 -
Bisa10g0249 699 SUPERFAMILY Protein kinase-like (PK-like) 547 687 IPR011009 -
Bisa10g0249 699 Pfam Protein tyrosine and serine/threonine kinase 550 686 IPR001245 GO:0004672|GO:0006468
Bisa10g0249 699 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Bisa10g0249 699 Gene3D Ribonuclease Inhibitor 405 477 IPR032675 -
Bisa10g0249 699 Gene3D Ribonuclease Inhibitor 37 185 IPR032675 -
Bisa10g0249 699 PANTHER OS04G0122200 PROTEIN 57 213 - -
Bisa10g0249 699 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 52 324 - -
Bisa10g0249 699 Gene3D Ribonuclease Inhibitor 186 318 IPR032675 -
Bisa10g0249 699 Gene3D Transferase(Phosphotransferase) domain 1 530 697 - -
Bisa10g0249 699 Gene3D Ribonuclease Inhibitor 319 404 IPR032675 -
Bisa10g0249 699 SUPERFAMILY RNI-like 248 534 - -
Bisa10g0249 699 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 325 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0249 Bisa-ChrBisa10 4620198 4623311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0249 530 697 Receptor kinase-like Gene Family AT5G20480 35.119 3.95e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa10g0249 PK_Tyr_Ser-Thr 2.6e-05 CL0016