Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0245 ATGTCTTCCACTTCAAAACAATCAACAATATCAGATGTCTTAAAGGGTTCTATAGGGTACATTCCACCAGAGTATGGGATGGGTGGCCAACCTTCTACACTCGGAGATATTTATAGCTACGGGATACTATTACTGGAGATTTTCACAAGGAAAAGGCCAACGAGTGAGGAATTTGAAGATGGGATGGGAATTCACCAATTTGCGACAATGGCTTTACCGAACCATGTCATGGATGTTCGGATCGGCTATCCATGA 255 0.4275 MSSTSKQSTISDVLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTRKRPTSEEFEDGMGIHQFATMALPNHVMDVRIGYP 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0245 84 Gene3D Transferase(Phosphotransferase) domain 1 1 82 - -
Bisa10g0245 84 Pfam Protein tyrosine and serine/threonine kinase 9 56 IPR001245 GO:0004672|GO:0006468
Bisa10g0245 84 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 81 - -
Bisa10g0245 84 SUPERFAMILY Protein kinase-like (PK-like) 10 71 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0245 Bisa-ChrBisa10 4544014 4544528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0245 14 79 Receptor kinase-like Gene Family AT3G47580 54.545 5.66e-22 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bisa10g0245 PK_Tyr_Ser-Thr 2.4e-05 CL0016