Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0233 ATGAAGACCCGCAAGGGGAAAGGATCGGTGAATAACTCAAAGGAAGCACTGAAGCTGGTTGATGATCGAAAGGTTGGCAAGCGAAAGGCTGCTTTGAAGCCCAACAAAAGTAGCACACGAAAGGCTAAGAAGGTGACGAAAGCCAAGAAAGATCCCAACAAACCGAAAAGATCACCCAGTGCATTTTTCATCTTCCTTGAGGAGTTCAGGAAGACCTTTAAGGCAGAAAATCCAAATGTGAAGGCTGTATCAGCTGTTGGGAAAGCTGGAGGAGAGAAATGGAAATCCCTGACTAGTGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAATGAAAGCTGAATATGAAAAACTTATGATTGCATATAATAAGAAGCAGGCAAGCTCAGCAGATGATGGTGACGAGGAATCGGACAGGTCCAAATCTGAAGTGAATGATGAGGATGAAGCCAGTGGAGAGGATGATGACGAAGAAGATGACGATGAAGAAGACGAAGATGAAGACTGA 510 0.4451 MKTRKGKGSVNNSKEALKLVDDRKVGKRKAALKPNKSSTRKAKKVTKAKKDPNKPKRSPSAFFIFLEEFRKTFKAENPNVKAVSAVGKAGGEKWKSLTSAEKAPYEAKAAKMKAEYEKLMIAYNKKQASSADDGDEESDRSKSEVNDEDEASGEDDDEEDDDEEDEDED 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0233 169 SUPERFAMILY HMG-box 46 127 IPR036910 -
Bisa10g0233 169 MobiDBLite consensus disorder prediction 129 147 - -
Bisa10g0233 169 MobiDBLite consensus disorder prediction 1 59 - -
Bisa10g0233 169 MobiDBLite consensus disorder prediction 8 28 - -
Bisa10g0233 169 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 7 157 IPR031061 -
Bisa10g0233 169 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 55 124 IPR009071 -
Bisa10g0233 169 Gene3D High mobility group box domain 26 142 IPR036910 -
Bisa10g0233 169 CDD HMG-box_AtHMGB1-like 56 116 - -
Bisa10g0233 169 MobiDBLite consensus disorder prediction 148 169 - -
Bisa10g0233 169 MobiDBLite consensus disorder prediction 126 169 - -
Bisa10g0233 169 Pfam HMG (high mobility group) box 55 124 IPR009071 -
Bisa10g0233 169 SMART hmgende2 54 125 IPR009071 -
Bisa10g0233 169 MobiDBLite consensus disorder prediction 29 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0233 Bisa-ChrBisa10 4340011 4342213 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Bisa10g0233 HMG_box 3.4e-22 CL0114