Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa10g0231 | ATGCGAAAGTCTTTCAAGGATTCACTCAAAGCTCTTGAAGCTGATATCCAGTTCGCCAATAACCTAGCTTCTGATTATCCAAGAGAGTACGATGGTGCCTGCCTCCAGATGAGATTGTCCTACAGTCCAGCTGCTCAATTTTTCCTTTTACTGGTTCAGTGGACCGATTGTCACCTTGCCGGAGCCCTGGGATTGCTTAGGATTCTCATATACAAGGCATACGACGATGGGAAGACTACAATGTCAGTTTATGAAAGAAAAGCCAGTCTGAAGGAGTTTTATGGTGTAATCTTTCCCTCTTTGTTGCAACTACATAGTGGAATCACCGATGTAGAAGACAGGAAACAAAAAGACCTATACGCGACTAAGTATAAGTCAAAAGATGCAATGAGCAAAGGGAAGATCTCCGAAATTGATTTAGAGAGAGAAGATGAATGTGGTATTTGCATGGAGATGAACAGCAAGGTTGTTTTGCCGCAATGCAATCACTCAATGTGCATGAAATGCTACCAAGATTGGCGTGCACGATCTCAATCTTGCCCCTTCTGCCGGGGAAGTCTGAAAAGAGTTAACTCCAAAGACCTGTGGATCTACATGAACAGCAAAGAGGTAGATGACTTGGCTTCGATCACCAAGGAGAATCTGAAGAGGCTATTTATATACATTGAAAAGTTGCCTCTCATAGTTCCAGAGCCTATTTTCATGTCTTATCCTCAGCGTTGAGGTAGATTGCTTGTTTTAGAGGCGTTTCTTTTACACTCTGAGATGAAAGACAGAGGAAGTGAAGTTAGATGA | 795 | 0.4252 | MRKSFKDSLKALEADIQFANNLASDYPREYDGACLQMRLSYSPAAQFFLLLVQWTDCHLAGALGLLRILIYKAYDDGKTTMSVYERKASLKEFYGVIFPSLLQLHSGITDVEDRKQKDLYATKYKSKDAMSKGKISEIDLEREDECGICMEMNSKVVLPQCNHSMCMKCYQDWRARSQSCPFCRGSLKRVNSKDLWIYMNSKEVDDLASITKENLKRLFIYIEKLPLIVPEPIFMSYPQRXGRLLVLEAFLLHSEMKDRGSEVR | 264 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa10g0231 | 264 | ProSiteProfiles | Zinc finger RING-type profile. | 146 | 184 | IPR001841 | - | |
Bisa10g0231 | 264 | FunFam | RING/U-box superfamily protein | 126 | 193 | - | - | |
Bisa10g0231 | 264 | SMART | ring_2 | 146 | 183 | IPR001841 | - | |
Bisa10g0231 | 264 | PANTHER | RING FINGER PROTEIN 41, 151 | 3 | 237 | - | - | |
Bisa10g0231 | 264 | Pfam | Zinc finger, C3HC4 type (RING finger) | 143 | 189 | - | - | |
Bisa10g0231 | 264 | ProSitePatterns | Zinc finger RING-type signature. | 161 | 170 | IPR017907 | - | |
Bisa10g0231 | 264 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 119 | 194 | IPR013083 | - | |
Bisa10g0231 | 264 | Coils | Coil | 2 | 22 | - | - | |
Bisa10g0231 | 264 | SUPERFAMILY | RING/U-box | 132 | 189 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa10g0231 | Bisa-ChrBisa10 | 4319823 | 4324125 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa10g0231 | 90 | 195 | C3H Transcription Factor Family | AT5G01960 | 29.730 | 1.39e-08 | 53.1 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa10g0231 | 10 | 4319823 | 4324125 | Bisa06g0226 | 06 | 5693912 | 5697793 | CCT | |
Bisa10g0231 | 10 | 4319823 | 4324125 | Bisa10g0231 | 10 | 4319823 | 4324125 | ECH |