Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0231 ATGCGAAAGTCTTTCAAGGATTCACTCAAAGCTCTTGAAGCTGATATCCAGTTCGCCAATAACCTAGCTTCTGATTATCCAAGAGAGTACGATGGTGCCTGCCTCCAGATGAGATTGTCCTACAGTCCAGCTGCTCAATTTTTCCTTTTACTGGTTCAGTGGACCGATTGTCACCTTGCCGGAGCCCTGGGATTGCTTAGGATTCTCATATACAAGGCATACGACGATGGGAAGACTACAATGTCAGTTTATGAAAGAAAAGCCAGTCTGAAGGAGTTTTATGGTGTAATCTTTCCCTCTTTGTTGCAACTACATAGTGGAATCACCGATGTAGAAGACAGGAAACAAAAAGACCTATACGCGACTAAGTATAAGTCAAAAGATGCAATGAGCAAAGGGAAGATCTCCGAAATTGATTTAGAGAGAGAAGATGAATGTGGTATTTGCATGGAGATGAACAGCAAGGTTGTTTTGCCGCAATGCAATCACTCAATGTGCATGAAATGCTACCAAGATTGGCGTGCACGATCTCAATCTTGCCCCTTCTGCCGGGGAAGTCTGAAAAGAGTTAACTCCAAAGACCTGTGGATCTACATGAACAGCAAAGAGGTAGATGACTTGGCTTCGATCACCAAGGAGAATCTGAAGAGGCTATTTATATACATTGAAAAGTTGCCTCTCATAGTTCCAGAGCCTATTTTCATGTCTTATCCTCAGCGTTGAGGTAGATTGCTTGTTTTAGAGGCGTTTCTTTTACACTCTGAGATGAAAGACAGAGGAAGTGAAGTTAGATGA 795 0.4252 MRKSFKDSLKALEADIQFANNLASDYPREYDGACLQMRLSYSPAAQFFLLLVQWTDCHLAGALGLLRILIYKAYDDGKTTMSVYERKASLKEFYGVIFPSLLQLHSGITDVEDRKQKDLYATKYKSKDAMSKGKISEIDLEREDECGICMEMNSKVVLPQCNHSMCMKCYQDWRARSQSCPFCRGSLKRVNSKDLWIYMNSKEVDDLASITKENLKRLFIYIEKLPLIVPEPIFMSYPQRXGRLLVLEAFLLHSEMKDRGSEVR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0231 264 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Bisa10g0231 264 FunFam RING/U-box superfamily protein 126 193 - -
Bisa10g0231 264 SMART ring_2 146 183 IPR001841 -
Bisa10g0231 264 PANTHER RING FINGER PROTEIN 41, 151 3 237 - -
Bisa10g0231 264 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
Bisa10g0231 264 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Bisa10g0231 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 194 IPR013083 -
Bisa10g0231 264 Coils Coil 2 22 - -
Bisa10g0231 264 SUPERFAMILY RING/U-box 132 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0231 Bisa-ChrBisa10 4319823 4324125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0231 90 195 C3H Transcription Factor Family AT5G01960 29.730 1.39e-08 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0231 10 4319823 4324125 Bisa06g0226 06 5693912 5697793 CCT
Bisa10g0231 10 4319823 4324125 Bisa10g0231 10 4319823 4324125 ECH