Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0228 ATGGGTAGTATTCAACAGCACGAGGAATGGCTGTTGGAGACCGGCGTCAAGGGTTTGAGCAAGGAGTTGAGGCATGGCCGAACTATTCACAACTTGTCATCTTCTTCGCTGCGCAAGAAATCGAACCTGACACTTGTTTCCAATATTCGGCACGGGTTGCTCAGGAGTTTGCTCGTCAATTTCCAAGAGGTCATTCTTGGGACCAAGCTTTCCATTCTCTTCCCCGCGATTGCCCTCGCCATTGTCGCCGAGGTTTGCGGGTTGGGAAGACCCTGGGTTTTTGCGTTGAGCTTACTTGGACTTATACCGCTTGCTGAACGTGTCAGCTTCTTGACAGAACAAGTTGCTTATTACACAGGCCCCACAGTTGGAGGACTTTTAAACGCAACATGTGGCAATGTCACGGAGCTCATAATAGCAATATTTGCTCTCAGCAGTAATAAAATAGCTGTGGTTAAGTATTCTCTCTTGGGTTCAGTCCTTTCAAACCTTCTTCTAGTTCTTGGAACCTCTCTCTTTTGTGGTGGAATAGCAAATCTTCGACTAGAACAAAAATATGACAGAAGACAAGTAGATGTGAATTCACTCATGCTGCTGCTTGCATTATTGTGCCATTTGCTGCCTATGCTGTTCAGATATTCTGGTGCATCGGCCGCTCTCACTACAGATCCATCTCTCCACTTGTCAAGAGCGGCTAGCATCGTGATGCTGCTTGCTTACTTTGCTTACCTGGTCTTTCAGCTGTGGACACACCGCCAATTATTTGAAGCTGAGGATGAAGAAGACAATGATGTTAACGTTGTAGAAGAAGCAGTGATAGGATTCTGGAGTGGGTTTACTTGGCTGGTTGGACTGACTGTACTAATTGCTATCTTGTCTGAATATGTGGTGGAGACAATTGAGGATGCTTCAGAATCTTGGAGCCTGTCTGTCAGCTTCCTTAGCATTATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTAGGTGTTGCTTTAGGTTCTGCAACTCAAATTTCCATGTTTGTGATTCCCGTGTGTGTGGTTATTGCTTGGATGATGGGTATCAAAATGGACCTTAACTTCAATCTCTTTGAGACTGGCTCTCTTGCCTGGGCAATTTTAGCGACAACCTTCGCATTACAGGATGGAACTTCACATTATATGAAAGGCCTTATTCTCCTGCTCTGCTACATTGTTATTGGGACATGTTTTTTTGTGCAGAGAACACCAATCAACCAAGCTAATATTACCAACACGACCCTTATACCAGTAACTGAAGCAGTTTTAAGAGCTTAA 1344 0.4442 MGSIQQHEEWLLETGVKGLSKELRHGRTIHNLSSSSLRKKSNLTLVSNIRHGLLRSLLVNFQEVILGTKLSILFPAIALAIVAEVCGLGRPWVFALSLLGLIPLAERVSFLTEQVAYYTGPTVGGLLNATCGNVTELIIAIFALSSNKIAVVKYSLLGSVLSNLLLVLGTSLFCGGIANLRLEQKYDRRQVDVNSLMLLLALLCHLLPMLFRYSGASAALTTDPSLHLSRAASIVMLLAYFAYLVFQLWTHRQLFEAEDEEDNDVNVVEEAVIGFWSGFTWLVGLTVLIAILSEYVVETIEDASESWSLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQISMFVIPVCVVIAWMMGIKMDLNFNLFETGSLAWAILATTFALQDGTSHYMKGLILLLCYIVIGTCFFVQRTPINQANITNTTLIPVTEAVLRA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0228 447 Pfam Sodium/calcium exchanger protein 279 416 IPR004837 GO:0016020|GO:0055085
Bisa10g0228 447 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
Bisa10g0228 447 NCBIfam calcium/proton exchanger 76 421 IPR004798 GO:0006816|GO:0015369
Bisa10g0228 447 Gene3D - 121 275 IPR044880 -
Bisa10g0228 447 NCBIfam calcium/proton exchanger 56 421 - -
Bisa10g0228 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Bisa10g0228 447 FunFam Vacuolar cation/proton exchanger 266 422 - -
Bisa10g0228 447 FunFam Vacuolar cation/proton exchanger 121 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0228 Bisa-ChrBisa10 4293021 4296504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0228 17 426 Antiporters AT2G38170 69.471 0.0 571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0228 10 4293021 4296504 Bisa06g0221 06 5611038 5615701 CCT
Bisa10g0228 10 4293021 4296504 Bisa10g0228 10 4293021 4296504 ECH