Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0210 ATGGATGCCAAGGACATCCTAGGTTTGCCCAAAACTTCTTTGCCAATTCAAGAGAAAAAGTCTCGACCCCAGAAAGATTCACAGAGAAAGCCAGATGGCATTTCGCGGGAGGTGTATGCGCTCACAGGTGGTTTGGCACCACTTATGCCTGCAATTGATTCGTCTCAATTGAAGAAAAGGCCTCCCTCAGACGAGAAGATCACTTGGCAGTGGCTTCCTTTCACAAACTCTGCTCGCAAAGATAATCTTCAACTTTATCATTGGGTCCGAGTGGTAAATGCTGTTCCACCAACTGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTAAATGTTATCAAATACACAGATGAGGAGTATGAGAAGTATCTGATAGATCCTACGTGGACTAAGGAAGAGACAGATAAACTGTTTGACTTGTGTGAGAGGTTTGATCTCCGATTCATTGTGATAGCTGATAGGTTCCCATCATCTCGAACTATGGAGGAATTGAAGGACCGATACTACAGTGTATCTCGGGCTATATTGGTTGCTAGGGCTCCATCTCCTGCGGATGTTGCAGCGCATCCTTTGGTTAAGGAACCCTATAATGTTTCACAAGAGGTGGAGAGGAAACGAGCACTGTCCATGTACCTCTCTCAGACAAAGCAACAAGAGCGAAAAGACCAAGAGGTGCTTGCTGAAGCAAAAAGAATAACTGAGTCGCGCATGCCTGCAAAGGTTGCTGAAGAGACTGAGGTTGCCGCTGCATCAAATGCTGGTGCAGAAGCTACAGAGAGGGCTATCCCTGGTGATGCTCCATCAAGTGTTCAGCTTCCATCCACTGTTGTTCCTTCCACATCTACAGCAGATAATGCATCTACTCTTGCTTCCCTCCGCATACTTCGTGTGTATTTGAGAACTTATGCACTTGAGCAAATGGTGCAAGCTGCAAGCTCGTCTGCTGGATTACGGACTATCAAACGGGTGGAGCAAACACTGCAAGAACTTGGGGTTAATTTAAAACCAAGGGTTCCGACCAAAGCTGTTTGTGCAGAGCATCTCGAACTGAGAAAAGAAATACTAACTCTGCTGAATCTTCAGAAACAGCTGCAGTATAAGGAGGCTGAAGGTTCATCTTTTCGTGATGGTTCATACACTGAAGCACCTGGCACACCAAAGGATAGGACATTTATTCCTGACTCTCTGAGCTTTGGAGGGGAAAGGGTTGGTAAAAGAGACCAAAAACGCAAGGCACCTGGACGGATGTCAGAAGCTCCATCGTCACCAGCTCAGTCTAAAAGACCTAGAAAACTAAAGGCCTCGGATCTATAA 1314 0.4581 MDAKDILGLPKTSLPIQEKKSRPQKDSQRKPDGISREVYALTGGLAPLMPAIDSSQLKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVNAVPPTGDYSFAKYNKSVNVIKYTDEEYEKYLIDPTWTKEETDKLFDLCERFDLRFIVIADRFPSSRTMEELKDRYYSVSRAILVARAPSPADVAAHPLVKEPYNVSQEVERKRALSMYLSQTKQQERKDQEVLAEAKRITESRMPAKVAEETEVAAASNAGAEATERAIPGDAPSSVQLPSTVVPSTSTADNASTLASLRILRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLQELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSFRDGSYTEAPGTPKDRTFIPDSLSFGGERVGKRDQKRKAPGRMSEAPSSPAQSKRPRKLKASDL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0210 437 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 420 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Bisa10g0210 437 MobiDBLite consensus disorder prediction 1 36 - -
Bisa10g0210 437 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 313 378 IPR008468 GO:0005634|GO:0045892
Bisa10g0210 437 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Bisa10g0210 437 CDD SANT_DMAP1_like 129 171 - -
Bisa10g0210 437 Gene3D - 98 184 - -
Bisa10g0210 437 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Bisa10g0210 437 SMART sant 125 174 IPR001005 -
Bisa10g0210 437 MobiDBLite consensus disorder prediction 400 414 - -
Bisa10g0210 437 SUPERFAMILY Homeodomain-like 125 175 IPR009057 -
Bisa10g0210 437 MobiDBLite consensus disorder prediction 371 437 - -
Bisa10g0210 437 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0210 Bisa-ChrBisa10 3878928 3883592 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa10g0210 DMAP1 2.1e-06 No_clan