Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0179 ATGGAGAAGAAGCCATCAGTGAGACCTTATGTGAGATCAAAGATGCCGAGGCTCCGATGGACCCCCGATCTTCATCTTCGTTTTGTTAATGCTGTTCAAAGACTTGGAGGAGAAGAGAGAGCAACGCCAAAGTTGGTTCTCCAATTGATGAACATCAAAGGTTTGAGTATTGCACATGTCAAGAGCCATTTACAGATGTATAGGAGCAAGAAGATAGATGATCCAAACCAAGTATTAGCAGCTCAAAGGCGTCTTGTGGAAACTGGAGACAGAAATATTTACAATCTCAGCCAACTTCCCATGCTCCAAGGTTATAATCCAAGCCAAAATTCAACCTACAGATATGGATATGGAGAGGCTCCTTCGGGTGTGTACAACAAAATGGTTCATAGACCTCTCCCGGGTCAGAGTTCAATCTACGAATCCGGATCAGTAGGGTTTCATAGCATTTTCCAGGTGGATACTTCAAATTTTCTGAGACAATCATCGTCAACAAGCAAAATCTATGAACCAAAAGATGATCAAATTCTCTCATTTAGTGGTCATGAACCATTATGCAATCGAAGCAGAACGAACCATACTATCAACGATCTTAACCCATTTACCCATATAGAGTCAACAAGAAGAAAACAAGATGAGCTTATTCCATTTATGAAGGATCAAGATGTAAAAAAGACACTCAAAAGGAAGGCTACTTCAGAGATTGATGATCATCTTGACCTAGATCTATCACTCAAGTTGAATTCTAGGGTTGATATTGCAGATAAGAATCATGATGATGAAGTTGATAGTAATCTCTCCCTCTCTTTGTACTCTCAATCATCATCTTCTAATAATCTTATTAGGAGAAGCAGGTTGAAGGAAGAAGAACATTGTAATAAGGAGGAATCAAGGAGGAAAAGTGCAAGTACTCTGGATCTGACTATATGA 930 0.3946 MEKKPSVRPYVRSKMPRLRWTPDLHLRFVNAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKIDDPNQVLAAQRRLVETGDRNIYNLSQLPMLQGYNPSQNSTYRYGYGEAPSGVYNKMVHRPLPGQSSIYESGSVGFHSIFQVDTSNFLRQSSSTSKIYEPKDDQILSFSGHEPLCNRSRTNHTINDLNPFTHIESTRRKQDELIPFMKDQDVKKTLKRKATSEIDDHLDLDLSLKLNSRVDIADKNHDDEVDSNLSLSLYSQSSSSNNLIRRSRLKEEEHCNKEESRRKSASTLDLTI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0179 309 MobiDBLite consensus disorder prediction 282 302 - -
Bisa10g0179 309 FunFam Myb family transcription factor 14 72 - -
Bisa10g0179 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 72 IPR017930 -
Bisa10g0179 309 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 187 IPR046955 GO:0003700
Bisa10g0179 309 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Bisa10g0179 309 MobiDBLite consensus disorder prediction 279 309 - -
Bisa10g0179 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 16 71 IPR006447 GO:0003677
Bisa10g0179 309 Gene3D - 15 72 - -
Bisa10g0179 309 Pfam Myb-like DNA-binding domain 18 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0179 Bisa-ChrBisa10 3116471 3118406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0179 6 73 G2-like Transcription Factor Family AT2G42660 80.882 1.04e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa10g0179 Myb_DNA-binding 8.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0179 10 3116471 3118406 Bisa10g0179 10 3116471 3118406 ECH