Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0153 ATGTCGACTGATATCCTTTGTGCGACCAAGAAATCGAGGAAGAGACGACGAAGTGGAAATGGCTCTGTGATAGACACTCTTGAGAAGTGGAAAAAGTATAACAACGAGCTCAAGTCCATTAAAAATGAGGCGATGAGTGCAAATCACAAAGCTCCTGCGAAGGGCTCGAGAAAGGGGTGCATGAGAGGCAAAGGCGGGCCTCAGAACTCGGATTGGAACTACAGGGGTGTGAGACAGAGGATTTGGGGGAAGTGGGTGGCTGAAATTCGTGAACCGATAAATGCAAACCACAATGCAGGAAATAAAAAACCGAACCGGCTATGGCTCGGCACTTTCTCCACCGCACTTGAAGCTGCCCTTGCTTATGATGAAGCAGCCAAAGCCATGTACGGTCCATGTGCTCGCTTGAACTTTCCTGCGTATAATACAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGACCAACATGCTTTAGTGAACAAACAGAGGAAACAGGGGAAACAGAGAAGAAACAGAGGAGATATGAGGGTGTTGTGGTGAAGAGTGAAGAAACACAGGAAACAGGGGAAACACAGAAGAAACAGAGGAGACATGAGGGTGTTGTGGTGAAGAGTGAAGAAACAGAGGAAACAGGGGATTTCAGAGTGATTAAGAGTGAAGCTTCCTTTGGGAAGAAGCAGATGGAGGAAGCGATTTCTGAGATTTTGGGACTATGTAGATCTGACCACTCAGAAAATGAGAAGTATGAAGATTCAATTGAGAGAAGATTTGAAGATGAGGATTTGATCAGTTCTGGGGATTTGCCTGTGTATGTGAACAATGTGAAGGAGGCAGATGTAGAGTTGGGTCACTATGATTATAGTTTCTTGAGACCGGATTATGACTTTGGCTTATTGGAAGAGAAGAACTTGCTTAGTATATGGTTCCCACATATAGCTTCTTAA 981 0.4424 MSTDILCATKKSRKRRRSGNGSVIDTLEKWKKYNNELKSIKNEAMSANHKAPAKGSRKGCMRGKGGPQNSDWNYRGVRQRIWGKWVAEIREPINANHNAGNKKPNRLWLGTFSTALEAALAYDEAAKAMYGPCARLNFPAYNTGGEEEEEEEEEEEEEEEEEEEEGPTCFSEQTEETGETEKKQRRYEGVVVKSEETQETGETQKKQRRHEGVVVKSEETEETGDFRVIKSEASFGKKQMEEAISEILGLCRSDHSENEKYEDSIERRFEDEDLISSGDLPVYVNNVKEADVELGHYDYSFLRPDYDFGLLEEKNLLSIWFPHIAS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0153 326 CDD AP2 73 140 IPR001471 GO:0003700|GO:0006355
Bisa10g0153 326 MobiDBLite consensus disorder prediction 175 219 - -
Bisa10g0153 326 SUPERFAMILY DNA-binding domain 74 140 IPR016177 GO:0003677
Bisa10g0153 326 Coils Coil 141 166 - -
Bisa10g0153 326 MobiDBLite consensus disorder prediction 140 219 - -
Bisa10g0153 326 MobiDBLite consensus disorder prediction 44 72 - -
Bisa10g0153 326 FunFam Ethylene-responsive transcription factor 2 73 140 - -
Bisa10g0153 326 ProSiteProfiles AP2/ERF domain profile. 73 139 IPR001471 GO:0003700|GO:0006355
Bisa10g0153 326 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Bisa10g0153 326 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Bisa10g0153 326 MobiDBLite consensus disorder prediction 144 170 - -
Bisa10g0153 326 Gene3D AP2/ERF domain 73 140 IPR036955 GO:0003700|GO:0006355
Bisa10g0153 326 SMART rav1_2 73 145 IPR001471 GO:0003700|GO:0006355
Bisa10g0153 326 MobiDBLite consensus disorder prediction 1 23 - -
Bisa10g0153 326 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 254 - -
Bisa10g0153 326 Pfam AP2 domain 74 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0153 Bisa-ChrBisa10 2534219 2537081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0153 13 139 AP2-EREBP Transcription Factor Family AT2G40340 54.615 1.40e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa10g0153 AP2 1.4e-13 CL0081