Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0126 ATGGGAAATTGTTGTACATATGATGCTTCTACTAGATGTCCATTTGAGAATAATAGAGAATTTGAGAGTGAAGAAGAAGTTATTATCACAAACGATGAAGGTGGAGGCAGAATCAGGCTTAAAGGGTCTTCTAAGTTCGTATCAATGTACAGCCAACAAGGAAAAAAAGGAGTCAATCAAGATTCAATGACAGTTTGGGAGGACTTCACTGGACAAAAAGATATGATCTTTTGTGGCGTGTTCGATGGCCACGGTCCTTATGGGCATATAGTTTCACGTTTGATCCGTGACAATTTACCCTCAAAGCTTTCTGCAGCGGTCAAAATGTCGCAGCAAAAACTCTCTGAATATTCCGACGCTTATGCTACAGATTCTGACAATAATAACCAAAACATGTCACTGTCCCTTGCCTCATGGGAGAACAGCTTTGTGAAATCCTTCAATGGGACCGATGAAGACGTCGCTCGAGAGATTAATACTAACAGCTTTTGCAGCGGTAGCACTGCCGTCACTATAATCAAACAGGGAGACCAACTGGTAATTGGAAATTTGGGGGATTCTCGTGCAGTTCTTTGCACAAAAGGAGACAAAGACCAGCTTGTTGCAGTTCAACTTACTGTTGACTTGAAACCAAATCTTCCAAGTGAAGCTGCAAGAATTCAAAGATGCGAAGGTAGAATATTCGCAGAAGAACAAGAGCCAGAAGTGTACAGATTGTGGATGCCTGAGGAAGACTGCCCTGGACTTGCAATGTCAAGAGCCTTTGGAGATTTTTGCTTGAAAGATTATGGCCTCATCGCAATTCCTGACATCTCTTTTCGAAAAATAACAAAGAATGATGAATTTGTGGTTTTGGCAACTGATGGGATTTGGGATGTGCTGACGAACAAGGAAGTAATAAACATAGTTGTTTCAGCACCAAGAAAGTCCATAGCAGCAAAATTGTTAGTAGAGAGTGCTGTGAAAGCATGGAAGTACAAGTTTCCTGGTGTTATGGCTGATGATTGTGCAGCCGTATGCTTGTTCCTCAAAGACTCTTCAACCAAATCTTCAATTGAAGTGACTCAGGAAAATAAATACAGAAGGAAGAAACATGGTCGTAGATCTTCTAAAAATGTAAAAACTGAGCTTGCAGAATCAAATAAGGACAACTGGGAAGCCCTAATAGGGTTGTCCAGAGCCAACTCTGTCTCGAAAATCCCAAGGCTCGCCGGAGATGTCAACCAGCCGGCAGTGTCTCTATTGCCTGAGGACGTTGAAGTTCACTAG 1269 0.42 MGNCCTYDASTRCPFENNREFESEEEVIITNDEGGGRIRLKGSSKFVSMYSQQGKKGVNQDSMTVWEDFTGQKDMIFCGVFDGHGPYGHIVSRLIRDNLPSKLSAAVKMSQQKLSEYSDAYATDSDNNNQNMSLSLASWENSFVKSFNGTDEDVAREINTNSFCSGSTAVTIIKQGDQLVIGNLGDSRAVLCTKGDKDQLVAVQLTVDLKPNLPSEAARIQRCEGRIFAEEQEPEVYRLWMPEEDCPGLAMSRAFGDFCLKDYGLIAIPDISFRKITKNDEFVVLATDGIWDVLTNKEVINIVVSAPRKSIAAKLLVESAVKAWKYKFPGVMADDCAAVCLFLKDSSTKSSIEVTQENKYRRKKHGRRSSKNVKTELAESNKDNWEALIGLSRANSVSKIPRLAGDVNQPAVSLLPEDVEVH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0126 422 Pfam Protein phosphatase 2C 74 319 IPR001932 -
Bisa10g0126 422 CDD PP2Cc 46 343 IPR001932 -
Bisa10g0126 422 ProSiteProfiles PPM-type phosphatase domain profile. 46 343 IPR001932 -
Bisa10g0126 422 SUPERFAMILY PP2C-like 43 345 IPR036457 -
Bisa10g0126 422 MobiDBLite consensus disorder prediction 354 376 - -
Bisa10g0126 422 SMART PP2C_4 30 341 IPR001932 -
Bisa10g0126 422 PANTHER PROTEIN PHOSPHATASE 44 341 IPR015655 GO:0004722|GO:0006470
Bisa10g0126 422 Gene3D - 39 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0126 Bisa-ChrBisa10 2004842 2011544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0126 36 403 PP2C-type Phosphatase Gene Family AT1G16220 44.811 1.64e-126 373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0126 10 2004842 2011544 Bisa06g0100 06 1920071 1923538 CCT
Bisa10g0126 10 2004842 2011544 Bisa10g0126 10 2004842 2011544 ECH