Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0122 ATGACGACCTCCTTCACTGAGCTCCTTTCCATGGAAAACCACTGGGCTGCTTCGGAAATACCCAAATTCAAGTCAACCCCACCTCCTTCCTTGCCCCTCTCTCCCTCCCCTCTTTCTCCTTCCTCCTATTTCGCTGTCCCTAATTCTGGGTTTAGCCCCACCCAGTTCTTGAACTCGCCTCTGTTCAATCTTTCATCGCCCAATGTTCTTCCGTCTACTGAGAGTTTTGATAAGAAGGAGGAGGAGAAAACATTCTCTGACTTCTCTTTCCAAACCCAAAAGCCCTCATCCTTCTTTGAGTATTCCTCAAGCATGTTTCAAGCGGAACCACTGAAAGAAAAAGCATGGATTGAGAAGACAGCAACAAAATCTGAATATCCATTATCAACTCAGAGCTTCTCTTCAGAAATGGCTTCAACCAGACCACAAATGCAAACCAATTCGGCTCCGGTTTCGGGTTACTCTAACCCCACCAATCCGGTTCCGGTTCAGTCTATCAGAGAGCAAAAGAGGTCAGAAGATGGGTATAACTGGAGAAAGTACGGACAGAAACAGGTGAAAGCTAGCGAAAATCCACGCAGTTATTACAAGTGCACCCATCCGACTTGCTCGATGAAAAAGAAAGTGGAGAGGGCCTTGGATGGACAAATAACCGAAATAGTATACAAGGGAAGCCATAACCATCCCAAGCCTCAGTCTACTAGAAGATCAAGCTCTCAATTGGTTCAACCAGCTTCCTCCTGCACCAACTCTGGGATTTCTGAACAATCCATAGTGACTCTAGGGAATCCACAGGCCGATCCTGTCTCAACACAAGAAGATTCTTCGGTCTCAGTTGGAGAAGATGAGTTTGAGCAAACGTCACAGACTTGTTACTCTGGGGGAGATGACACTGACTTTGGCCCTGATGCTAAAAGATGTAAAAGAGAGGATGAAATTGATGGCTTTTGCACCTCTGGGAATAGAACTGTGAGAGAACCGAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGCTATAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAACCCGAGGAGCTACTACAAGTGCACAGCCTCGGGTTGTTCAGTGAGAAAACACATTGAGCGAGCAGCACACGACATGAAAGCCGTGATCACAACTTACGAAGGGAAACACAACCACGACGTTCCGGCAGCACGCGGCAGCGGGAGCTACAATGTCAATAGAACCTCACTGAGTAGCAACAACACCACCGACAACACTGTACCTCCGCCTATAAGGCCGTCTGCAGTGACCAGTTTTTCCAGCAAATCGAGTTTCACAAATTCACTTCACAACACAAGCCTGTCATCGTCTGCAAGTCAAGAACCATTTCCACTGGACTTCTTGCAGAGCCCAGGAAGTTTCGGGTTTTCGGATTTTGACAGATCAATCGGGTCATACAACAACCATGGACAATACTCAGATGCTACATACCTCAAGGCCAAGGATGAGAGGAAGGATGATTCATATTTTCAGTCATTGATGTCCAAGAACTTCTGA 1551 0.4597 MTTSFTELLSMENHWAASEIPKFKSTPPPSLPLSPSPLSPSSYFAVPNSGFSPTQFLNSPLFNLSSPNVLPSTESFDKKEEEKTFSDFSFQTQKPSSFFEYSSSMFQAEPLKEKAWIEKTATKSEYPLSTQSFSSEMASTRPQMQTNSAPVSGYSNPTNPVPVQSIREQKRSEDGYNWRKYGQKQVKASENPRSYYKCTHPTCSMKKKVERALDGQITEIVYKGSHNHPKPQSTRRSSSQLVQPASSCTNSGISEQSIVTLGNPQADPVSTQEDSSVSVGEDEFEQTSQTCYSGGDDTDFGPDAKRCKREDEIDGFCTSGNRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTASGCSVRKHIERAAHDMKAVITTYEGKHNHDVPAARGSGSYNVNRTSLSSNNTTDNTVPPPIRPSAVTSFSSKSSFTNSLHNTSLSSSASQEPFPLDFLQSPGSFGFSDFDRSIGSYNNHGQYSDATYLKAKDERKDDSYFQSLMSKNF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0122 516 SUPERFAMILY WRKY DNA-binding domain 332 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 ProSiteProfiles WRKY domain profile. 335 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 ProSiteProfiles WRKY domain profile. 167 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 Pfam WRKY DNA -binding domain 173 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 Pfam WRKY DNA -binding domain 341 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 Gene3D WRKY domain 158 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 MobiDBLite consensus disorder prediction 126 192 - -
Bisa10g0122 516 MobiDBLite consensus disorder prediction 406 436 - -
Bisa10g0122 516 MobiDBLite consensus disorder prediction 261 280 - -
Bisa10g0122 516 MobiDBLite consensus disorder prediction 227 250 - -
Bisa10g0122 516 SMART WRKY_cls 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 SMART WRKY_cls 340 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 MobiDBLite consensus disorder prediction 396 436 - -
Bisa10g0122 516 Gene3D WRKY domain 327 393 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 SUPERFAMILY WRKY DNA-binding domain 166 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa10g0122 516 FunFam WRKY transcription factor 162 232 - -
Bisa10g0122 516 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 427 IPR044810 GO:0003700
Bisa10g0122 516 FunFam WRKY transcription factor 33 327 393 - -
Bisa10g0122 516 MobiDBLite consensus disorder prediction 126 166 - -
Bisa10g0122 516 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0122 Bisa-ChrBisa10 1972474 1975653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0122 157 512 WRKY Transcription Factor Family AT2G38470 51.882 1.04e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa10g0122 WRKY 2.8e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0122 10 1972474 1975653 Bisa10g0122 10 1972474 1975653 ECH