Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0098 ATGTCTTCTGGGGACAGAAAAAAAGCAGCTCGTCGTCAACATAGATTGCAGCAACTTCGAACTGCCACAAATTCTACTTCTATGAATAAAGCCTCAATTATTGTGGATGCATCAAAATACATAGAAGAGTTGAAGCAAAAAGTGGAGGGACTGAACGCAGAACTTGGAAGCAGCAGCAGTACTCAAGATCATCAATTGCCTAGGGTAACAGTGGAAACCCTAGAAAGGGGATTCATGATTAATGTATTCTCAGAAAGGAACTGCCCTGGAATGCTAGTCTCCATACTTGAAGCTTTTGAAGAGCTTGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAGGACGCCTTTCAGCTAGAAGCTGTGGGAGGAGAAAGTGAAGAGAACGAGAGCATAGATGCACAAGTGGTGAAGCAAGCAGTTCTTCAAGCAATAAGGAACATAGAGTGA 450 0.4311 MSSGDRKKAARRQHRLQQLRTATNSTSMNKASIIVDASKYIEELKQKVEGLNAELGSSSSTQDHQLPRVTVETLERGFMINVFSERNCPGMLVSILEAFEELGLDVLDARVSCEDAFQLEAVGGESEENESIDAQVVKQAVLQAIRNIE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0098 149 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 68 IPR036638 GO:0046983
Bisa10g0098 149 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 146 - -
Bisa10g0098 149 CDD ACT_UUR-ACR-like 89 145 - -
Bisa10g0098 149 Coils Coil 34 61 - -
Bisa10g0098 149 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0098 Bisa-ChrBisa10 1515912 1518344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0098 15 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.544 2.58e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0098 10 1515912 1518344 Bisa10g0098 10 1515912 1518344 ECH
Bisa10g0098 10 1515912 1518344 Bisa05g1716 05 32017664 32024707 ECH
Bisa09g0405 09 5860390 5862170 Bisa10g0098 10 1515912 1518344 ECH
Bisa10g0098 10 1515912 1518344 Bisa09g0405 09 5860390 5862170 ECH