Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0079 ATGTTTCAGGCCTTACGAGAAATGCAGAGGAATGCTGTTTTTGAGGAGACAGCAGAGTCCACGACCACGATTCCGACGAAGGACGAGGTTCCGGAGGGGGTGCTCCTGTTCGGAAAGTACGAGGTTAGCAGGTTCATCGGCTTCGGAGGCTTCGCGAAGGTCTACGAAGCTACCAATGTGGTCACGAATCAGAGCGTCGCCGTGAAGGTCGTGAGCAAGCGCAAGATAGAGCAAGCCGGCATGACGTCGCAAGTTGAGAGGGAAATCGCTATCATGCGCCGGCTGAGCCACCCCCACATCGTCCAACTCTACGAGGTCCTCGCCACGAAGACGAAGATTTACTTCGTCATGGAGTTCGCGAAGGGCGGCGAGCTCTTCCAAAAAATCGCCAAGGAGCGGCAATTCTCGCAGGATCTCAGCCGCCGGTATTTTCAGCAGCTAATCTCGGCCGTCCAGCACTGTCACGCCAACGGCGTGTTCCACCGCGATTTAAAGATCGACAACCTCTTGTTGGACGAGGATTTGAACCTCTTGGTTTCGGATTTCGGGCTGAGTGCCGTGAAGGAGCAGATCCGACCCGATGGGTTACTCCACACTCTTTGTGGGACCCCTGCTTACGTGGCACCGGAGATGCTCGAGAAGAAAGGCTACGATGGAGAGAAAGTCGACGTGTGGTCTTGCGGCGTCGTTTTGTTCGCCCTCACCACTGGATACTTACCCTTCAGCGATCCCAACGTGGCGACGTTGTTGAGAAGAATCTATCGGGGCAAATATCGGATCCCCTCATGGGTCTCTCCCGATTTGAAACGACTCATTTCACGCTTGCTTGACCCGAACCCGACAACCCGGATCACCATCTCTGGGATCTTACGAGACCCGTGGTTCAGAAAAGGTTACAGGGAGATCAAAGTGAAGCAGAAGGTTCCGGAATGGGAAGACGACAACAGCAGTAGCAGAACGAAGTGCTTGAATGTCTTCGATTTGATATCATTCTCATCGGGTTTCGACATGTCGGGTCTCCTCGTGACCGACCCGAAGGTTTCGGACTGCGTGGAACGCATCATTTCGGAGGAGACTCCGCAGAGGATTGTGGCGGCAGCGGAGGAGGCGATGGCGGCCGAGGGAGTGACGGTGACGAGGAAGGAAGACGGGTGTGGCGCGAAGTTTGAGGGGCAGGATGGTAATTTAGTTGTCCTGGTGAGTATTTACCGTTTAACGGATGAGCTGGTTGTGATTGAGGTAAAGAGAAGGGAAAAAGAAAGTGGAAGTGGTTCACATTTTTGGGGTGATAAATTGAGGTCCAGATTATTGGAATTAATCCATAAACCGGAAGCGCCGGTAATTATGAAACTTTAG 1356 0.531 MFQALREMQRNAVFEETAESTTTIPTKDEVPEGVLLFGKYEVSRFIGFGGFAKVYEATNVVTNQSVAVKVVSKRKIEQAGMTSQVEREIAIMRRLSHPHIVQLYEVLATKTKIYFVMEFAKGGELFQKIAKERQFSQDLSRRYFQQLISAVQHCHANGVFHRDLKIDNLLLDEDLNLLVSDFGLSAVKEQIRPDGLLHTLCGTPAYVAPEMLEKKGYDGEKVDVWSCGVVLFALTTGYLPFSDPNVATLLRRIYRGKYRIPSWVSPDLKRLISRLLDPNPTTRITISGILRDPWFRKGYREIKVKQKVPEWEDDNSSSRTKCLNVFDLISFSSGFDMSGLLVTDPKVSDCVERIISEETPQRIVAAAEEAMAAEGVTVTRKEDGCGAKFEGQDGNLVVLVSIYRLTDELVVIEVKRREKESGSGSHFWGDKLRSRLLELIHKPEAPVIMKL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0079 451 CDD CIPK_C 324 433 - -
Bisa10g0079 451 Gene3D Phosphorylase Kinase; domain 1 37 121 - -
Bisa10g0079 451 FunFam CAMK family protein kinase 35 342 - -
Bisa10g0079 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bisa10g0079 451 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Bisa10g0079 451 SUPERFAMILY Protein kinase-like (PK-like) 36 324 IPR011009 -
Bisa10g0079 451 Pfam Protein kinase domain 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0079 451 ProSiteProfiles Protein kinase domain profile. 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0079 451 Pfam NAF domain 321 379 IPR004041 GO:0007165
Bisa10g0079 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 33 416 - -
Bisa10g0079 451 Gene3D Kinase associated domain 1, KA1 319 442 - -
Bisa10g0079 451 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Bisa10g0079 451 SMART serkin_6 40 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0079 451 Gene3D Transferase(Phosphotransferase) domain 1 122 302 - -
Bisa10g0079 451 FunFam Aurora kinase A 34 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0079 Bisa-ChrBisa10 1255137 1256492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0079 36 439 CBL-interacting serine-threonine protein kinases AT2G30360 55.147 6.59e-162 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa10g0079 Pkinase 1.4e-70 CL0016