Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0061 ATGGTGAATATGCATCGCCGTCTTCTAGACGCCGAGCTAAGTATGCCGCCGGCATACGGGAACAATACCCGCGAATCGTTCATCAGCGATGCGAACTTCGACGCGAACATGGTGATCATCCTGGCTGCTCTGTTATGCGCATTGATTTGCGCGCTAGGTTTGAACTCGATAGTGCGATGTGCTTTGCGTTGTAGCCGAAGATTTTCCCCACAGACCAATGAACAAACAGCTTCTAGGGGCCTGAAGAAGCGCCATCTGAGCCAGATTCCGGTGAAGGTGTATGGTTCCGGAGTGAATATTCCGGCGACAGAGTGCCCGATCTGTCTGGGAGAGTTCGAGAAAGGAGACAGGGTGCGAATGCTGCCAAAATGCAATCACGGGTTCCATGTGAGGTGCATAGACACATGGCTCCTGTCACATTCTTCTTGCCCCAATTGTCGCCATTCGCTGCTAGAGAAATCGACGATTTCAAGTTCCAATGAAATGAGTGAAGGCGGTGGAGGAGGAGGAGGAGGAGGAGGAGTCAACGGAGCTCGGCCGCCGGAAGAAGGTTCCGACCGGCAAGGCAACGTCGTTGTGGTCGTCGAGCAGGCGAGTTAA 600 0.535 MVNMHRRLLDAELSMPPAYGNNTRESFISDANFDANMVIILAALLCALICALGLNSIVRCALRCSRRFSPQTNEQTASRGLKKRHLSQIPVKVYGSGVNIPATECPICLGEFEKGDRVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEKSTISSSNEMSEGGGGGGGGGGVNGARPPEEGSDRQGNVVVVVEQAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0061 199 CDD RING-H2_EL5-like 104 147 - -
Bisa10g0061 199 SUPERFAMILY RING/U-box 87 154 - -
Bisa10g0061 199 SMART ring_2 105 146 IPR001841 -
Bisa10g0061 199 MobiDBLite consensus disorder prediction 157 191 - -
Bisa10g0061 199 PANTHER RING-H2 FINGER PROTEIN ATL78 24 158 IPR044602 GO:0016567|GO:0016740
Bisa10g0061 199 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Bisa10g0061 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 152 IPR013083 -
Bisa10g0061 199 Pfam Ring finger domain 104 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0061 Bisa-ChrBisa10 885827 886426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0061 4 151 C3H Transcription Factor Family AT3G10910 58.385 1.14e-57 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0061 10 885827 886426 Bisa10g0061 10 885827 886426 ECH