Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0055 ATGCAATTCTTCCGATTCTTGATGTTTCTTCTTTTTGCTCCAACCCTGGTGATCTCTATCGACTCGTCCTTCAGCGACGACGTATTGGGGTTGATTGTGTTCAAAGCGGGTCTACGAGACCCGGAATCGAAACTCTCGAGTTGGAATGAAGACGATGATAGTCCCTGCAATTGGGTCGGAGTCAAATGCGACCCGACGACCAATCGGGTCTCTGCTTTAGTCCTCGACGGGTTTTCTCTTTCTGGGCATATTGATAAAGGGCTCTTGAGATTGCAGTTCCTTCAAGTTCTATCACTGTCCAGAAACAACTTCACAGGGTCCATAAACCCTGATCTTCCTCGCTTGGGGAGTTTACAAATTGTTGACATGAGCGAGAACAATCTCTCTGGGTCAATCCCACAAGAATTTTTCCAGCAATGTGGGTCTCTGAGAACAGTTTCATTTGCCAGAAACAAGCTTACTGGTAAAATTCCTGATTCCTTAAGCTCTTGCTCTATGTTAGCTTCTGTTAACTTCTCCTATAATCAGCTTCATGGAGAATTACCATCTGGGATATGGTATTTGAGAGGATTACAATCACTTGATCTGTCTAATAACTTGTTAGAAGGAGAGATTCCTGAGGGAATTGTGAATTTGTATGACTTGAGGGAGTTAAGTCTACAGAAGAATAGATTTACTGGTAAGATTCCTGGAGATGTTGGAGGCTGCTTGCTTTTGAAATCTCTTGATTTTAGTGGTAATTTTCTCTCTGGGAAACTTCCTGAGTCAATGCAGAGACTCAGCTCATGCACATCCCTCAGTTTACAGGGAAATTCATTTACAGGAGGCATTCCTGATTGGATTGGAGAACTGAAAAATCTAGAATTACTGGACCTTTCTGCAAATAAATTTTCAGGTTCGATTCCGAAATCAATAGGAAATCTCGATTCACTGAATAAACTAAACCTGTCGAGGAATCAGCTTACAGGAAACTTGCCAGGGTCAATGAGCAACTGCATTAAGCTGTTGGCTCTTGACATCAGCCACAACCAATTATCAGGCCATCTTCCTTCATGGATTTTTAGGATGGGTTTGCAAAATATCTCACTTTCAGGGAACATTGGTAAGAGCAATAATCCTTCGCTCATGTCAACACCCACATCTTTTCATGGCCTCGAGGATTTGGATTTGTCATCGAATGCGTTTTCTGGTGATCTTCCATCTAGCATTGGGGGTCTTAGTAGCTTGCAAGTCTTGAATGTGTCTGCCAATTATATTGCTGGTGCTATCCCAGTGAGTATAGGAGAACTTAAATCTTTGTACATTCTTGACTTGAGTGATAACAGGCTTAATGGAAGCATTCCTTATGAAATAGAAGGGTTGATTTCGCTCAATGAACTGAGACTACAGAAGAACTTTCTAAGTGGGAGAATTCCAACTCAAATTGAGAAGTGTTCATCTCTGATGTCTTTAAATCTTTCTCACAACAAGCTTACTGGTTCGATCCCTTCGTCCATTGCAAACCTAACGAATCTTCAGCACATAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCGAAGGAGCTGACAAATCTCTCCAACCTTTTCTCCTTCAATGTCTCCTACAATCATCTTCATGGTGAGCTACCAGTGGGTGGCTTCTTCAATACTATCTCTCCCTCATCTGTCTCTGCTAATCCATTGTTATGTGGTTCCATTGTCAAGCACTCCTGCCCATCTGTCCATCCCAAACCAATTGTCCTTAACCCTAATTCTTCTGGCTCAAATTCTGGGAGTTCGTCTCAAAATCGTCGTCATAAAAAGGTCATTCTCAGTATCTCTGCCCTTATTGCTATTGCCGCTGCTGCTTTTATTGCTGTTGGTGTGGTGGCTGTTACTGTTTTAAATGTCCATGTACGTTATTCAATGTCACATTCTGCTGCTCCATTTGCATTCTCCGGTGGTGATGACTATAGTTGTTCGCCCCCAAATGATACAAAGTATGGCAAACTTGTTATGTTTTCTGGTGATGCTGAATTTGCTGATGGCACCCATAATCTTCTCAATAAAGACAATGAAATTGGCCGGGGTGGATTTGGAGTTGTTTATCATACTGTCCTCCAAGACGGGCGTTCTGTTGCAATCAAGAAGCTTACAGTCTCTGGTTTGATTAAATCCCAAGAAGACTTTGAGAGGGAATTAAAAAATCTTGGGAAGATAAGGCACATTAATCTTGTGGCACTAGAAGGTTACTACTGGACTTCATCCTTGCAACTCCTAATCTATGAGTACCTATCCAGAGGGAGTTTGCATAAGCTTCTACACAACGAAAATAGCAAAGACATCCTTTCGTGGCGACAAAGGTTCAAGGTTATTCTCGGCATGGCGAAAGGGCTGGCCCATTTGCACCAAATGAACATAATCCACTACAATTTGAAGTCAACAAATGTTCTGATCGACTGCTCTGGCGAGCCAAAAATAGGAGATTACAGCCTGGTGAAGCTATTGCCAATTCTAGACCATTGTGTTTTGAGCAGCAAAATTCAGAGTGCACTTGGATACATGGCTCCCGAATTTTCTTGTCGGACAGTGAAGATCACCGAGAAATGTGATGTTTATGGTTTTGGGATCCTAGTTCTAGAAGTAGTGACCGGGAAAAGACCGGTAGAATATATGGAAGACGACGTGGTTGTTCTGTGTGACATGGTAAGGGGTGCATTGGAGGAAGGCAAAGTGGAACAATGTGTTGATGGGAGACTTCTAGGTAATTTTGCTGCAGAAGAAGCAATTCCTGTAATAAAATTAGGGTTAATTTGTGCATCACAAGTGCCATCAAATCGTCCAGACATGGCCGAGGTTGTCAACATTATAGAGTTGATCCAATGCCCTTCAGAAGGACAAGAGGAATTACAATAA 2898 0.422 MQFFRFLMFLLFAPTLVISIDSSFSDDVLGLIVFKAGLRDPESKLSSWNEDDDSPCNWVGVKCDPTTNRVSALVLDGFSLSGHIDKGLLRLQFLQVLSLSRNNFTGSINPDLPRLGSLQIVDMSENNLSGSIPQEFFQQCGSLRTVSFARNKLTGKIPDSLSSCSMLASVNFSYNQLHGELPSGIWYLRGLQSLDLSNNLLEGEIPEGIVNLYDLRELSLQKNRFTGKIPGDVGGCLLLKSLDFSGNFLSGKLPESMQRLSSCTSLSLQGNSFTGGIPDWIGELKNLELLDLSANKFSGSIPKSIGNLDSLNKLNLSRNQLTGNLPGSMSNCIKLLALDISHNQLSGHLPSWIFRMGLQNISLSGNIGKSNNPSLMSTPTSFHGLEDLDLSSNAFSGDLPSSIGGLSSLQVLNVSANYIAGAIPVSIGELKSLYILDLSDNRLNGSIPYEIEGLISLNELRLQKNFLSGRIPTQIEKCSSLMSLNLSHNKLTGSIPSSIANLTNLQHIDLSWNELSGSLPKELTNLSNLFSFNVSYNHLHGELPVGGFFNTISPSSVSANPLLCGSIVKHSCPSVHPKPIVLNPNSSGSNSGSSSQNRRHKKVILSISALIAIAAAAFIAVGVVAVTVLNVHVRYSMSHSAAPFAFSGGDDYSCSPPNDTKYGKLVMFSGDAEFADGTHNLLNKDNEIGRGGFGVVYHTVLQDGRSVAIKKLTVSGLIKSQEDFERELKNLGKIRHINLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHNENSKDILSWRQRFKVILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDYSLVKLLPILDHCVLSSKIQSALGYMAPEFSCRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNIIELIQCPSEGQEELQ 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0055 965 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 759 960 - -
Bisa10g0055 965 Pfam Protein kinase domain 683 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0055 965 Gene3D Ribonuclease Inhibitor 306 578 IPR032675 -
Bisa10g0055 965 SUPERFAMILY Protein kinase-like (PK-like) 683 955 IPR011009 -
Bisa10g0055 965 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 25 303 - -
Bisa10g0055 965 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Bisa10g0055 965 PRINTS Leucine-rich repeat signature 430 443 - -
Bisa10g0055 965 PRINTS Leucine-rich repeat signature 191 204 - -
Bisa10g0055 965 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Bisa10g0055 965 Gene3D Ribonuclease Inhibitor 239 305 IPR032675 -
Bisa10g0055 965 Pfam Leucine rich repeat 264 321 IPR001611 GO:0005515
Bisa10g0055 965 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Bisa10g0055 965 SUPERFAMILY L domain-like 42 375 - -
Bisa10g0055 965 SMART LRR_typ_2 284 307 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 115 139 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 430 454 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 188 212 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 308 332 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 382 406 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 526 550 IPR003591 -
Bisa10g0055 965 SMART LRR_typ_2 502 525 IPR003591 -
Bisa10g0055 965 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 186 951 - -
Bisa10g0055 965 Gene3D Phosphorylase Kinase; domain 1 658 758 - -
Bisa10g0055 965 ProSiteProfiles Protein kinase domain profile. 682 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0055 965 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 304 576 - -
Bisa10g0055 965 Pfam Leucine Rich Repeat 239 260 IPR001611 GO:0005515
Bisa10g0055 965 Pfam Leucine Rich Repeat 191 212 IPR001611 GO:0005515
Bisa10g0055 965 Gene3D Transferase(Phosphotransferase) domain 1 759 963 - -
Bisa10g0055 965 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Bisa10g0055 965 ProSiteProfiles Leucine-rich repeat profile. 480 502 IPR001611 GO:0005515
Bisa10g0055 965 SUPERFAMILY L domain-like 284 554 - -
Bisa10g0055 965 Gene3D Ribonuclease Inhibitor 138 234 IPR032675 -
Bisa10g0055 965 SMART LRR_sd22_2 502 528 - -
Bisa10g0055 965 SMART LRR_sd22_2 382 408 - -
Bisa10g0055 965 SMART LRR_sd22_2 284 310 - -
Bisa10g0055 965 SMART LRR_sd22_2 430 456 - -
Bisa10g0055 965 SMART LRR_sd22_2 188 211 - -
Bisa10g0055 965 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 676 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0055 Bisa-ChrBisa10 819530 822904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0055 8 962 Receptor kinase-like Gene Family AT5G01890 61.331 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bisa10g0055 Pkinase 1.2e-38 CL0016