Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0044 ATGAAGAAGTCTTTGGATAAAATAACAAAGCAAGAGGTGGCCAAACTGCTGCCACTTCTCACTGCTTACGTTACTTCTTTTGTTAGAGACAACCAAAGTTCTAAAGCTCAGCGATCATTTGGAATGAGAATCATGGCTTCGTTGCTGCGTCCCACTTCGACTCCTCTTCAACACAAAAGAACGACAATCTCTTTCTCTCCTCTGAAACCCACTGCCCCAAATAATCTTTCTTTCTTAATGCACCGTTTCAAGAGTAACCCTGCAAAATGTAAAGCTTTTCTCGAGAACATTCCAGAAGATTTGCTGGAGAACACCATATACCTGAACCAGTTCCCAGTTTTACGATCGGGATTAGTCCAATTTCAGAGAGTAACTCAAGACTTATCCGATTTCCAGAAATGGGCTTTTCTGATTTTCGCTGGATTGTCATGGGTTTATTTGACGGCAAGGCCTGGTGTTCTGATCGGCGCCATTGATGCCTACCTTCTGGCTCCTCTGCAACTGGGTTTGGACAATTTAACAGGAAGGAGGAATCTGAAGAGGGCTGATTTTATGATTAGAGATAAGATAGGAGAAGGGTCATTTGGGGTTGTTTATTCTGGGGTTGTGGTTCCAAAGAATGTGGATGTAGAAGAGAAGTTGCAGAAGAGGGGAAGAGGCAAGGCAACAACATTGGATGTGAAATCTAAGGATAAAGTTATTCTTAAAAAGGTGAAGGTTGGAGTCCAAGGCGCTGAAAAATTCGGTGATTTTGAGGAGTGGTTCAATTATAGGCTATCCAGAGCAGCTCCTGAAACATGTGCTGAGTTTCTTGGAAGTTTTGTAGCCGATAAAACAAATTCACAGTTCATCAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGCACTCTTGCTGATTACATGAAAGATCGTAACTTTCCTTCAAACTTAGAGTCTGTGATGTTCGGAAGGGTCTTGCAAGGTGCAGACTCTTTTAAACGAAATTCATTGATCATCAAGCAAATAATGCGCCAGATCATTACGTCTCTTAAGAAAATTCACGACACAGGCATTGTTCACAGAGATGTAAAGCCAGCCAACTTAGTAGTCACTAAACGGGGGCAGATCAAACTCATAGATTTCGGTGCAGCAACAGACCTTCGGATTGGAAAGAATTATGTGCCTGACAGTGCCTTACTGGATCCTGACTACTGCCCCCCTGAATTGTATGTACTTCCCGAAGAAACGCCAAATCCTCCTCCAGAGCCAATCGCAGCTTTACTTTCCCCGATCTTGTGGCAGTTGAATAGTCCCGATCTGTTTGATATGTATTCGGCTGGGATTGTACTCCTTCAAATGGCAATACCATCCTTAAGGTCTCCTTCTGCTTTAAAGAACTTCAATCTGGAAATAAAAACATGTAGCTATGATTTGAACAAGTGGAGAGACTATACTCGCCTCAAGTCGGACTTTCAAATTCTTGACTGTGACTCGGGTAGAGGGTGGAACTTAGCGACAAAGCTTATCTGTGAGAGAGGTTCCCTAAGAAGACGGCGTTTATCTGCTGCTGATGCTTTGAGGCATCCATATTTTCTTCTGGGTGGTGATCAAGCAGCTGCAGTCCTTTCAAAATTGAGCTTAAGCAGAAAGTGA 1641 0.4296 MKKSLDKITKQEVAKLLPLLTAYVTSFVRDNQSSKAQRSFGMRIMASLLRPTSTPLQHKRTTISFSPLKPTAPNNLSFLMHRFKSNPAKCKAFLENIPEDLLENTIYLNQFPVLRSGLVQFQRVTQDLSDFQKWAFLIFAGLSWVYLTARPGVLIGAIDAYLLAPLQLGLDNLTGRRNLKRADFMIRDKIGEGSFGVVYSGVVVPKNVDVEEKLQKRGRGKATTLDVKSKDKVILKKVKVGVQGAEKFGDFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFIKGGKWLVWKFEGDRTLADYMKDRNFPSNLESVMFGRVLQGADSFKRNSLIIKQIMRQIITSLKKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPDSALLDPDYCPPELYVLPEETPNPPPEPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSPSALKNFNLEIKTCSYDLNKWRDYTRLKSDFQILDCDSGRGWNLATKLICERGSLRRRRLSAADALRHPYFLLGGDQAAAVLSKLSLSRK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0044 546 SMART serkin_6 184 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0044 546 ProSiteProfiles Protein kinase domain profile. 184 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0044 546 Pfam Protein kinase domain 334 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0044 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Bisa10g0044 546 Gene3D Phosphorylase Kinase; domain 1 171 294 - -
Bisa10g0044 546 SUPERFAMILY Protein kinase-like (PK-like) 182 528 IPR011009 -
Bisa10g0044 546 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 95 546 - -
Bisa10g0044 546 Gene3D Transferase(Phosphotransferase) domain 1 321 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0044 Bisa-ChrBisa10 688291 691419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0044 184 383 MAP Kinase Kinase Kinase AT3G13530 25.616 5.98e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Bisa10g0044 Pkinase 4e-21 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0044 10 688291 691419 Bisa10g0044 10 688291 691419 ECH