Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0041 ATGAAGAACCTCAATGGCTGTTTTCCGTTTCTTCTTTTCTTGGTCTTAGCTCTGCAAGTTGTTCGAGCTGCGGACTACGTGCCGTCCGATAAACTCCTCTTGAGCTGTGGGGGTCCTCCAGATCCAACTGATACCGATGGCCGAAAATGGACCTCCGATATTGGGTCCAAGTTCACATCCTCCAAGGCGAACTCCACCACATCTCCTGCTGCAACCCAGAACCCGGCCGTGCCGGATGTTCCGTTCATGACGGCGCGAGTCTTTCGATCGGAGTTCACCTACACTTTTCCGGTGGCCTCTGGCCGGAAATTTATCCGTCTCTACTTCTACCCAGCTTCCTACGCCGGCCTCAATGCCTCGGATGCTCTCTTCTCCGTCACGGCGCAATCCTACACTCTGCTTAAAAACTTCAGCGTTGTTCAAACCATATTAGCTTTGAACTATGACTCTATTGTGAAAGAGTACTTGATCAATGTTGAAGGAGAATCGCTGAAGGTAACTTTTACTCCATCTCCCAATGCTTCAAATGCCTATGCTTTTGTTAATGGGATTGAGATTGTGTCCATGCCTCCTGATATTTATGATTCCGCTGATGGAACTACTATGATTGTGGGTACGATGACTCCTTACACTATTGATAATAGCACTGCACTTGAGAATGTTTATAGGTTTAATGTTGGTGGGAAAGATATCTCGCCCTCCCAAGATACCGGTTTGTTCAGGTCATGGTCTGATGATACTAAGTATCTCTATGGGGCTGCTTATGGAGTTACAGAGCCTGCTGATCCAGGGGTTAATATTAGTTATCCTCCAGGCACACCCACGTACGTTGCTCCAGTTGATGTCTACTCTACGGCTAGATCAATGGGACCAAATGCAGACATCAATATGAATTACAATTTGACTTGGATTCTCTCGGTTGATTCGGGGTTTTCTTATCTTGTGAGACTCCATTTCTGTGAGGGAACCACCAATGTGACCAAGGTTAATCAAAGGGTGTTTGATATATTCCTCAATAACCAAACTGCTCAAGAGGGGGCAGATGTTATCGCGTGGGCGGACCAATATGATCTTCCACATTCAAATGGGGTTCCAGTGTTTAAGGATTTCGTTGTGTTTGTTCCTGATGGGCAACCACAGCAGGATCTGTGGCTTGCACTTCATCCAGATACTGCTTCAAAGCCTCAGTATTATGATGCAATATTGAATGGATTGGAGGTATTCAAAATTAATGATTCTAATGGGAACCTTGCAGGGCCAAATCCCATTCCTGCTCCTAAGCAAGATCTCGTTGACCCATCATTGGCTAGACTCTCAAGTAAAGGCAAACTGAAGAATCAGAAAGGACTAATTGCTGGATGTGTTAGTGGAGGAGTTGTTCTAGCACTTGTTATTGGACTCTTTGCTTTTGCTGCATTGCGTCGTAGGAAGCATGGCAAGGATTCTAGTGCAAGTGATGGGCCATCTGGTTGGCTTCCTCTTTCTCTATATGGTAATTCACACTCTGCTGCTTCTGCCAAGACCAACACAACAGGAAGTTATGCATCCTCTCTCCCGTCAAACCTTTGTCGCCATTTCTCATTTGCTGAAATTAAGGCTGCCACAAACAACTTTGACGAGGCCTTGGTCCTTGGTGTGGGAGGATTTGGTAAAGTTTACAAAGGAGAAATTGATGGTGAAACGACCAAAGTAGCAATTAAACGTGGGAACCCACTCTCTGAGCAGGGAGTTCATGAGTTCCAAACCGAGATTGAAATGCTCTCTAAACTTCGCCACCGTCATCTTGTTTCACTGATTGGCTACTGTGAAGAAAACTGTGAAATGATTCTTGTCTATGACTACATGGCTTATGGAACTCTCCGGGAGCATCTGTACAAGACCCAGAAACCTCCACTCCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGAGGTTTACACTATCTCCACACTGGTGCCAAGCACACAATCATCCACCGCGATGTGAAGACTACTAACATTTTACTGGATGAGAAGTGGGTGGCAAAGGTTTCTGATTTCGGATTGTCAAAAACCGGCCCAACATTGGATAACACGCATGTGAGCACCGTAGTTAAGGGAAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTGACTGATAAATCCGATGTTTACTCCTTCGGAGTGGTTCTATTCGAGATACTCTGTGCTCGTCCTGCTCTGAACCCTACCCTTCCAAAGGAACAAGTGAGCTTAGCAGAGTGGGCAGCTCATTGTCACAACAAAGGCATTCTTGACCAACTTGTTGATCCTTATCTGAAGGGGAAGATAGCACCTGAATGCTTCAAGAAGTTTGCTGAGACTGCGATGAAGTGTGTGGCTGATCAGGGAATCGAGAGACCATCGATGGGTGATGTGCTGTGGAACCTTGAGTTTGCTTTACAGCTGCAAGAAAGTGCAGAAGAGAGTGGGAAGGGCATTGGTGGAGAGCATCTCATTGAAGGGGAGGAGCCACTGTATGTAAATTCTAAAGGGAAGAAGAACCCTAATGATGATGCATTACCATGTTATGATGCTAATGTAAGTGACTCCAGGAGCACGGGCATGAGTATGAGCATCGGTGGCCGGAGCTTAGCCAGCGAAGACTCAGATGGATTAACGCCCAGTGCCGTATTCTCACAGATCATGAATCCGAAAGGGCGTTAA 2703 0.4613 MKNLNGCFPFLLFLVLALQVVRAADYVPSDKLLLSCGGPPDPTDTDGRKWTSDIGSKFTSSKANSTTSPAATQNPAVPDVPFMTARVFRSEFTYTFPVASGRKFIRLYFYPASYAGLNASDALFSVTAQSYTLLKNFSVVQTILALNYDSIVKEYLINVEGESLKVTFTPSPNASNAYAFVNGIEIVSMPPDIYDSADGTTMIVGTMTPYTIDNSTALENVYRFNVGGKDISPSQDTGLFRSWSDDTKYLYGAAYGVTEPADPGVNISYPPGTPTYVAPVDVYSTARSMGPNADINMNYNLTWILSVDSGFSYLVRLHFCEGTTNVTKVNQRVFDIFLNNQTAQEGADVIAWADQYDLPHSNGVPVFKDFVVFVPDGQPQQDLWLALHPDTASKPQYYDAILNGLEVFKINDSNGNLAGPNPIPAPKQDLVDPSLARLSSKGKLKNQKGLIAGCVSGGVVLALVIGLFAFAALRRRKHGKDSSASDGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALVLGVGGFGKVYKGEIDGETTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHNKGILDQLVDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGIGGEHLIEGEEPLYVNSKGKKNPNDDALPCYDANVSDSRSTGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0041 900 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
Bisa10g0041 900 MobiDBLite consensus disorder prediction 866 900 - -
Bisa10g0041 900 Gene3D Phosphorylase Kinase; domain 1 523 614 - -
Bisa10g0041 900 CDD TM_EGFR-like 451 478 - -
Bisa10g0041 900 PANTHER OS03G0124300 PROTEIN-RELATED 9 482 IPR046957 GO:0004672
Bisa10g0041 900 ProSiteProfiles Protein kinase domain profile. 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0041 900 SMART serkin_6 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0041 900 Gene3D Transferase(Phosphotransferase) domain 1 615 826 - -
Bisa10g0041 900 FunFam FERONIA receptor-like kinase 31 190 - -
Bisa10g0041 900 SUPERFAMILY Protein kinase-like (PK-like) 512 811 IPR011009 -
Bisa10g0041 900 Pfam Protein tyrosine and serine/threonine kinase 543 806 IPR001245 GO:0004672|GO:0006468
Bisa10g0041 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Bisa10g0041 900 FunFam FERONIA receptor-like kinase 216 411 - -
Bisa10g0041 900 FunFam Receptor-like protein kinase FERONIA 510 614 - -
Bisa10g0041 900 CDD STKc_IRAK 544 810 - -
Bisa10g0041 900 MobiDBLite consensus disorder prediction 866 893 - -
Bisa10g0041 900 Pfam Malectin-like domain 34 410 IPR024788 -
Bisa10g0041 900 Gene3D - 32 189 - -
Bisa10g0041 900 Gene3D - 217 411 - -
Bisa10g0041 900 FunFam Receptor-like protein kinase FERONIA 615 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0041 Bisa-ChrBisa10 645327 648029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0041 15 900 Receptor kinase-like Gene Family AT3G51550 74.212 0.0 1321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa10g0041 Malectin_like 5.3e-45 CL0202