Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0034 ATGCTGAGTCCGAGATTATATGGATATGCGTTGGCTGTTTCGTTATGTTATATCATTTACGCATCAGCCGCACAAAGAACGGATCCTTTGGAAGACAAGAACTTCAGATTGAATGATGATGCTACGTTTTGTCCAAACATCACTATAAGTTGGAAAATGGTGAATGCACTGGTGGAAATCAAGAAAAGTTTGATAGATCCCATGCACAATCTGAGGAACTGGAGTAAGGGTGACCCATGTATGTCAAACTGGACTGCGGTTTGGTGTTTCGATACAGTTGGGGTCGATGGTTACTTCCATATTCGTGATCTGTACTTAATGACCATGAATCTCTCGGGAAGCCTTGCACCTCAGCTTGGTCAACTATCTCATCTTCGAATAATGAATTTCATGTGGAATGATCTGACAGGCTCTATACCAAAGGAGATCGGAAAAATCACATCATTGAAACTCTTACTCCTGAATGGCAATAGGTTATCGGGTACTTTACCAGATGAGCTTGGCAATCTCTCAAATTTGAATAGGCTCCAACTCGATCAAAACCAATTCTTGGGTCCAATACCAAAATCGTTTGCCAATTTGACCAATGTTAGACACCTCCACATGAACAACAATTCATTTAATGGTCAAATTCCACCTGAGCTTTCAAAGCTATCCAAGCTTCTGCACTTGCTTGTGGACAACAATGACTTATCTGGATACCTTCCACCAGAATTCTCCATATTACCGGAGTTGCGAATAATCCAACTTGATAACAACAATTTCAGTGGAGCTGAAATTCCTTCTACCTATGCAAACTTAACCAGCCTAGTAAAACTAAGTCTTAGAAACTGCAGTTTGCGAGGTGCTGTTCCTGATCTTAGTCCGATACACAAGCTTAAATATTTAGATCTTAGCTGGAATTATCTTACTGGACCCATACCATCAAAGAAACTTGCAGATAATATGACAACTATTGATCTGTCCAATAATAACATCAATGGATCTATTGCTGAAAACATCTCATTACTTCCTTTCCTTCAAAGACTTTCACTTCAGAACAATCTCTTGTCTGGGCCTATCCCTGCTAGTATATGGCTGAACATGTCCTTCAGTAGGAGTGCTAAACTCACAGTTGATCTCCGTAACAACTCATTTTCAGACATTTTGGGAAGCCTAAATCCGCCAGCAAATGTCACCTTGAGGTTTGCTGGCAATCCTATCTGCAAGAATTCTAACATTCAAAATATTGGTCAATATTGTGGATCTGAAGGGCTGGAAGCCGACAAATCAACAAATTCAAAAACCGTTTGTCCAATTCCAGCTTGTCCAGTGGATGGTTCCTATGAATATGTCCCAGCTTCTCTTGTTCCCTGCTTTTGTGCAGCACCTCTGAGAATTGGATACCGGCTTAAAAGCCCAAGTTTTTCGTACTTTCCTCCTTATATAACGCAGTTTGAGTTATATTTAAAACAGTCTTTAAACTTGGACTTTCAACAATTATCAATAGATTCTTATGCTTGGGAAGTGGGACCTCGTCTTAGGATGTATTTGAAACTTTTTCCTAAGTTCAACTCTAGTGTCTTCAATACAAGCGAGGTCCGTCACATTGAAGGGATATTTGGATCATGGAATTTTCCTCCCACTGATTTTTTTGGACCATATGAACTCTTGAACTTCACTCTTCTTGGACCTTATGCAAATATAAATATTGAGTCAGAGAGGAGGAAGATCAGTACAGCCTTGTTAGCAGTTGCTATAACTGCAGCTATTGCTTGTGTTGTAGCAATCTCGGCAATAGTCACTCTCATTATAGCTAGAAGACATATCAGATACCACCCCAAGCTGTCCAGGAATCGTATGTCCTCTAATATTTCTATTAAAATAGATGGTGTGAAAGCATTCACTTTTAAAGAACTGGCTCTTGCAACTGACAATTTTAGCAGCTCCGCTCAAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCATTTTGTCTGATGAAACAATTGTGGCAGTAAAGCGAGTAGAAGAAGGTTCCTTACAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTCCTATCAAGGTTACATCATCGTAACCTAGTCTCGTTGATTGGGTACTGTGATGAAGAAGGAGAACAGATTCTGGTTTACGAATTCATGCCTAGTGGTACCTTGCGGGAGTGGATTTCTGGTAAAAGGAAAGGAAACCTAAATTTTGGTACGAGGTTGCGGATTGCAATGGGTGCAGCCAAAGGCATCTCGTATCTCCATACTGAGGCTAACCCTCCTATATTCCACAGAGATATCAAAGCCAGTAACATACTTCTGGACCACATGCTTATTGCTAAAGTGGCTGATTTTGGACTCTCACGTCTTGCACCATACCTTGAAGATGGAGGGACCGCACCTAAATATGTTTCAACAGTTGTGAGGGGAACACCAGGTTACCTAGATCCAGAGTATTTCTTGACTCATAAGTTGACAGACAAAAGTGATGTCTATAGCCTAGGAATTGTGTTTCTGGAGCTTTTGACTGGCATGAAACCAATATCACATGGGAAAAACATCGTACGCGAGGTTAATGTGGCTCGTCAGTCTGGTACGATGTTTTCAATTATAGATAGCAGAATGGGAAGCTATCCCTCTGATTGCGTTGAGAAGTTTCTAACTCTAGCTCTGAGTTGTTGCCATGAGAGTCAAGAGGAGAGACCATGCATGCTGGATGTGGTGAGGGAACTGGAAATTATTCTTGCAATGTTGCCAGAAACTGAGACTACTTTCTCAGATACCTCTGATAATTCTGGTAAACTGGCATCATCATCGTCAGCAGCATCCTACATGGCAAGGGAGGAGAAACATGTATCCTCGACTGTGTTGTCGGGAAGCAACCTTGTCAGTGATGTTATGCCCACCATTGTTCCACGTTAA 2916 0.4108 MLSPRLYGYALAVSLCYIIYASAAQRTDPLEDKNFRLNDDATFCPNITISWKMVNALVEIKKSLIDPMHNLRNWSKGDPCMSNWTAVWCFDTVGVDGYFHIRDLYLMTMNLSGSLAPQLGQLSHLRIMNFMWNDLTGSIPKEIGKITSLKLLLLNGNRLSGTLPDELGNLSNLNRLQLDQNQFLGPIPKSFANLTNVRHLHMNNNSFNGQIPPELSKLSKLLHLLVDNNDLSGYLPPEFSILPELRIIQLDNNNFSGAEIPSTYANLTSLVKLSLRNCSLRGAVPDLSPIHKLKYLDLSWNYLTGPIPSKKLADNMTTIDLSNNNINGSIAENISLLPFLQRLSLQNNLLSGPIPASIWLNMSFSRSAKLTVDLRNNSFSDILGSLNPPANVTLRFAGNPICKNSNIQNIGQYCGSEGLEADKSTNSKTVCPIPACPVDGSYEYVPASLVPCFCAAPLRIGYRLKSPSFSYFPPYITQFELYLKQSLNLDFQQLSIDSYAWEVGPRLRMYLKLFPKFNSSVFNTSEVRHIEGIFGSWNFPPTDFFGPYELLNFTLLGPYANINIESERRKISTALLAVAITAAIACVVAISAIVTLIIARRHIRYHPKLSRNRMSSNISIKIDGVKAFTFKELALATDNFSSSAQVGQGGYGKVYKGILSDETIVAVKRVEEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCDEEGEQILVYEFMPSGTLREWISGKRKGNLNFGTRLRIAMGAAKGISYLHTEANPPIFHRDIKASNILLDHMLIAKVADFGLSRLAPYLEDGGTAPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMKPISHGKNIVREVNVARQSGTMFSIIDSRMGSYPSDCVEKFLTLALSCCHESQEERPCMLDVVRELEIILAMLPETETTFSDTSDNSGKLASSSSAASYMAREEKHVSSTVLSGSNLVSDVMPTIVPR 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0034 971 SUPERFAMILY L domain-like 65 410 - -
Bisa10g0034 971 Gene3D Ribonuclease Inhibitor 52 167 IPR032675 -
Bisa10g0034 971 Gene3D Ribonuclease Inhibitor 312 403 IPR032675 -
Bisa10g0034 971 Gene3D Transferase(Phosphotransferase) domain 1 716 932 - -
Bisa10g0034 971 Gene3D Ribonuclease Inhibitor 168 241 IPR032675 -
Bisa10g0034 971 Gene3D Ribonuclease Inhibitor 242 311 IPR032675 -
Bisa10g0034 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Bisa10g0034 971 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 716 926 - -
Bisa10g0034 971 Gene3D Phosphorylase Kinase; domain 1 611 715 - -
Bisa10g0034 971 Pfam Leucine rich repeat N-terminal domain 55 89 IPR013210 -
Bisa10g0034 971 FunFam Leucine-rich repeat protein kinase family protein 604 715 - -
Bisa10g0034 971 PANTHER RECEPTOR-LIKE PROTEIN 55 60 915 - -
Bisa10g0034 971 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 52 212 - -
Bisa10g0034 971 Pfam Protein kinase domain 642 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0034 971 SMART serkin_6 640 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0034 971 SUPERFAMILY Protein kinase-like (PK-like) 625 926 IPR011009 -
Bisa10g0034 971 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Bisa10g0034 971 ProSiteProfiles Protein kinase domain profile. 640 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa10g0034 971 CDD STKc_IRAK 646 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0034 Bisa-ChrBisa10 428697 444338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0034 5 921 Receptor kinase-like Gene Family AT5G01950 61.472 0.0 1110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa10g0034 Pkinase 4.5e-48 CL0016