Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0016 ATGGAAGGAGTGGATGGGTTGATAGAGAAGCTTCTGGAAGCTCGGAGGAACAGAGGGAAGCGGATTCAGCTGATAGAGTCAGAAATTCGGAACCTGTGCGTGACGGCAAAAGAAATCTTGGTGAACCAGCCTAACCTTCTGGAATTGGAAGCTCCGATCAACGTTTGTGGTGACATACACGGGCAATATCCAGACCTGCTGCGACTGTTCGAGTACGGAGGATTTCCGCCGCAAGCCAACTACCTATTCCTAGGGGACTATGTGGACAGAGGAAAACAGAGTATCGAGACAATATGTCTGCTGCTTGCGTACAAGATCAAATTCCCGGAAAACTTCTTCCTGCTTCGAGGGAATCACGAATGCGCCTCCATCAACAGAATTTACGGATTCTACGACGAGTGCAAGAGGAGATTCAGCGTGCGGCTGTGGAAGATCTTCACGGATTGCTTCAACTGCCTGCCTGTGGCCGCCGTGATCGACGACAAGATCCTGTGCATGCACGGGGGGCTCTCCCCCGAGATGGAGAGCTTGAATCAGATCAGAGACATAGCACGGCCAGTGGACGTGCCCGACCAGGGCCTCCTCTGTGACCTCCTCTGGGCTGATCCCGACAGAGACATCAAGGGGTGGGGTGAGAATGACAGGGGTGTGTCCTACACTTTCGGACCCGACAAGGTGGCTGAGTTCTTGAAGAAGCACGATCTTGACCTCATATGCCGGGCTCACCAGGTGGTGGAAGACGGTTACGAATTCTTCGCGGAGAGGCAACTGGTGACCATATTCTCAGCGCCAAACTACTGTGGAGAGTTCAATAATGCGGGAGCACTGATGTGCGTCGACGAAACTCTACTCTGCTCCTTTCAAATACTCAAACCCTGGACAGGCAGAGCCCCTCATACCGATTAG 906 0.5287 MEGVDGLIEKLLEARRNRGKRIQLIESEIRNLCVTAKEILVNQPNLLELEAPINVCGDIHGQYPDLLRLFEYGGFPPQANYLFLGDYVDRGKQSIETICLLLAYKIKFPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPEMESLNQIRDIARPVDVPDQGLLCDLLWADPDRDIKGWGENDRGVSYTFGPDKVAEFLKKHDLDLICRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFNNAGALMCVDETLLCSFQILKPWTGRAPHTD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0016 301 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 12 293 - -
Bisa10g0016 301 SMART pp2a_7 24 294 IPR006186 GO:0016787
Bisa10g0016 301 Pfam Calcineurin-like phosphoesterase 52 244 IPR004843 GO:0016787
Bisa10g0016 301 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Bisa10g0016 301 SUPERFAMILY Metallo-dependent phosphatases 21 293 IPR029052 -
Bisa10g0016 301 CDD MPP_PP1_PPKL 4 292 - -
Bisa10g0016 301 Gene3D - 2 297 IPR029052 -
Bisa10g0016 301 FunFam Serine/threonine-protein phosphatase 1 300 - -
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Bisa10g0016 301 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Bisa10g0016 301 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0016 Bisa-ChrBisa10 251835 252811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0016 31 240 Calmodulin-binding Proteins AT5G63870 31.600 3.08e-32 119