Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000762g0005 ATGTCAAGCCCTGGCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGATACGCACAGCGCCTAGTATCCATCGTTTACGGCTAGGACTACTGGGTAAGCGTGACTTATCTGTCAACTTTTCCACTATCACCCCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCTGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTGTAG 372 0.4651 MSSPGGILNALATALHGSIRTAPSIHRLRLGLLGKRDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000762g0005 123 PRINTS Ribosomal protein S12 signature 47 62 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 PRINTS Ribosomal protein S12 signature 32 47 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 PRINTS Ribosomal protein S12 signature 115 123 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 PRINTS Ribosomal protein S12 signature 63 82 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 PRINTS Ribosomal protein S12 signature 99 115 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 PRINTS Ribosomal protein S12 signature 82 99 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 44 120 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 NCBIfam 30S ribosomal protein S12 35 120 IPR005679 GO:0003735|GO:0006412|GO:0015935
Bisa1000762g0005 123 SUPERFAMILY Nucleic acid-binding proteins 35 120 IPR012340 -
Bisa1000762g0005 123 CDD Ribosomal_S12 44 115 IPR005679 GO:0003735|GO:0006412|GO:0015935
Bisa1000762g0005 123 ProSitePatterns Ribosomal protein S12 signature. 48 55 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000762g0005 123 Gene3D - 20 122 IPR012340 -
Bisa1000762g0005 123 Pfam Ribosomal protein S12/S23 36 118 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000762g0005 45 104 Cytoplasmic Ribosomal Protein Gene Family AT3G09680 44.118 3.10e-09 50.1