Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000642g0010 ATGCACCACCTGTATCCGCGTTCCCGAAGGCACCCCTTTCTTTCAAGAGGATTCGCGGCATGTCAAGCCAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGTAAGCGTGACTTATCTGTCAACTTTTCCACTATCACCCCCAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCTGGATTTGAAATCACTGCTTATATACCTGGTATTGGCCATAATTTACAAGAACATTCTGTAGTCTTAGTAAGAGGGGGAAGGGTTAAGGATTTACCCGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTGTAG 501 0.489 MHHLYPRSRRHPFLSRGFAACQARTTGVSNPIRSPSFRLSVSVSAQQSAFAVGVLSDLYAFHRSTGNSLCPYRTPACKRDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000642g0010 166 SUPERFAMILY Nucleic acid-binding proteins 70 163 IPR012340 -
Bisa1000642g0010 166 CDD Ribosomal_S12 87 158 IPR005679 GO:0003735|GO:0006412|GO:0015935
Bisa1000642g0010 166 NCBIfam 30S ribosomal protein S12 77 163 IPR005679 GO:0003735|GO:0006412|GO:0015935
Bisa1000642g0010 166 PRINTS Ribosomal protein S12 signature 125 142 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 PRINTS Ribosomal protein S12 signature 106 125 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 PRINTS Ribosomal protein S12 signature 75 90 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 PRINTS Ribosomal protein S12 signature 158 166 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 PRINTS Ribosomal protein S12 signature 142 158 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 PRINTS Ribosomal protein S12 signature 90 105 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 Gene3D - 47 165 IPR012340 -
Bisa1000642g0010 166 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 86 163 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 ProSitePatterns Ribosomal protein S12 signature. 91 98 IPR006032 GO:0003735|GO:0005840|GO:0006412
Bisa1000642g0010 166 Pfam Ribosomal protein S12/S23 73 161 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000642g0010 88 147 Cytoplasmic Ribosomal Protein Gene Family AT3G09680 44.118 9.65e-09 49.7