Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000505g0009 ATGCGGGTGGAAGGCAAGGTCATCCAGTGGGATGACGCCAAGGGCTACGGCTTCATTGCGCCTTCGGCCGGTGGGTCGAAGATCTTTGTCCACGCCCGCGCATTCGGTCTGCGCCCCCGTCGCCCCTTTGTGGGCGAGCGGGTGAGCTACGAAGTCGGGTTGGACGGGCAAGGGAAATCGCGCGCCATCGAGTGGCCCTGCCGGCCGCTCGTCACGGGCCGCGTCCTCCTCACCCCGGGCGGGTGCTTCCACGGGCACGGCCAGCAATGCCGAGCTCTGGCTCATCCCCCTCTTCGCCAGTCTGGTGCTGCTGACGCACCTGGCCTGGCCTCTGCCCCATGCCTTGTGGGGCGGCTACATGGCCATGAGTCTGGCCACCTTCATCGTGTATGCCCTGGACAAACGAGCCGCCCGGCTCGGTCAATGGCGGGTGAAGGAGAGCACTTTGCACGGATTGGCCGTGCTGTGCGGTTGGCCGGGCGCCCTGTTGGCGCAACACTTGCTCAGACACAAAAGCGCCAAGCCCAGCTTTCGGCGCCTCTTCTGGTTGAGCACCGCGCTCAACATCCTTTTGTTCGTTCTTGTTTTCACGCCGCTGCTGACGTCCGTGCTGAGGTCGTCCGGAGTGGCCGTTGTCTGAGCCATGTTGCAGTTGAAAGTGATCGATACCGCGGATGTGCCGGCCGTCCTGGCCCTGCAGGCCCGGTGTTATGCGCCGCAGTTCCATGA 729 0.6461 MRVEGKVIQWDDAKGYGFIAPSAGGSKIFVHARAFGLRPRRPFVGERVSYEVGLDGQGKSRAIEWPCRPLVTGRVLLTPGGCFHGHGQQCRALAHPPLRQSGAADAPGLASAPCLVGRLHGHESGHLHRVCPGQTSRPARSMAGEGEHFARIGRAVRLAGRPVGATLAQTQKRQAQLSAPLLVEHRAQHPFVRSCFHAAADVRAEVVRSGRCLSHVAVESDRYRGCAGRPGPAGPVLCAAVP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000505g0009 242 SUPERFAMILY Nucleic acid-binding proteins 2 59 IPR012340 -
Bisa1000505g0009 242 PANTHER CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED 3 71 - -
Bisa1000505g0009 242 CDD CSP_CDS 3 64 IPR002059 GO:0003676
Bisa1000505g0009 242 Gene3D - 1 69 IPR012340 -
Bisa1000505g0009 242 SMART csp_8 4 67 IPR011129 GO:0003676
Bisa1000505g0009 242 Pfam 'Cold-shock' DNA-binding domain 4 63 IPR002059 GO:0003676
Bisa1000505g0009 242 ProSiteProfiles Cold-shock (CSD) domain profile. 2 67 IPR002059 GO:0003676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CSD Bisa1000505g0009 CSD 1.3e-09 CL0021