Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000281g0016 ATGGGGTCCGTCACCAGCTGGGGCGACCTCGGCAAGGCGGTCGATCGCGCCGCGGCGGGGTTGCAGGCGCTGGGCGTGGTGAAGGGGACGCGCGTCGCGCTCTGCCTGCCGAATACGCCCTATTATCCAATCCTGTTCTTCGCGACGCTGAAGGCGGGTGGCATCGTCGTCAACGTCAACCCGCTCTACGTCGAGCGCGAGCTCGCGCACCTAATCCACGATTCGGGCGCGGAGATCATCGCGACGCCTGACGTCGCCGAAATTCAGGCGCGGGTGCTGAAGGTCGCGGGCGACGCGGGTATGCGCCACGTCATTACCTGCCCGATTGCCGACGCCCTGCCGACGATCAAGAAATTCGCCTACAAGCTGGTCAAGCGTCAGGAGATCGGCCGCGCCCCGCGAGACGCGCGTCATCTGTTCTTCGCAGACCTGATGGCGAAGCGCGCCACGCCTGCTCCCGTCGCGGTCGCGCCGGACGAGGTGGCGGTGCTGCAATATACCGGCGGCACCACCGGCGTGCCCAAGGCGGCGATGCTCTCCCACGCGAATATCGTCGCGAACACCGATGCGATGCTGGTCCATGTCGGGGGCGAGACGCCCGACCAGGATCGCGTGCTCGGTGTCTTGCCGCTGTTCCACGTCTTCGCGCTGACCAACGTGCTGACCTTCTCGACGTTGGTCGGTGCAGAGATGATCCTGCTGCCGCGCTTTGAAATGAAGCAGTTGCTCGGCACGCTGAAGCGCACCCGGCCAACCTATTTCCCGGCAGTGCCCACGATCTACAATGCGCTCGCCAATCTGGGGGAGGGGCAGCGTCCCGACCTGTCCGCGATCAAGGTCTGCATTTCGGGCGGCGCACCGCTGCCGATCGAGGTGCGCCATGCGTTCGAGACGAACACGGGCGCGAAGCTGGTCGAGGGCTATGGCCTGTCCGAAGCCTCGCCGATCATCACCTGCAACCCGTTCGACGGCGTCAACAAGGAAGGCTCGGCCGGTCTGCCCTTCCCCGGCACGACGATCGAAATCCGCGATCGCGAAGACCCGTCGCGCATCATGCCCAAGGGCGAGAAGGGCGAAATCTGCGCGCGTGGGCCGCAGGTCATGAAGGGCTATTGGCACAAGCCTGCCGAAACCGACGCGGCCTTCGCCGACGGTGCGCTGCGGACGGGCGACGTCGGCTATCTCGACGACGACGGCTATCTCTTCATCGTCGACCGGATCAAGGACATGATCCTATGTGGCGGCTACAACGTCTATCCGCGCGTGATCGAAGAGGCGCTGTACGAACATCCCGCCGTCGTCGAAGCCGTCGTGATCGGCGTACCCGATGCGCATCGCGGCCAGGCGCCCAAGGCCTTCGTCGTCCTGTCTGAACCGGGGCAGCGTGACGGGCGCCGACCTGCGCGACTTCCCTGCGCGACAAGATCAGCAAGATCGAGCTTCCCCGCGAGGTCGAAATCCGCGACAGTCTGCCCAAGACGTTGA 1485 0.6539 MGSVTSWGDLGKAVDRAAAGLQALGVVKGTRVALCLPNTPYYPILFFATLKAGGIVVNVNPLYVERELAHLIHDSGAEIIATPDVAEIQARVLKVAGDAGMRHVITCPIADALPTIKKFAYKLVKRQEIGRAPRDARHLFFADLMAKRATPAPVAVAPDEVAVLQYTGGTTGVPKAAMLSHANIVANTDAMLVHVGGETPDQDRVLGVLPLFHVFALTNVLTFSTLVGAEMILLPRFEMKQLLGTLKRTRPTYFPAVPTIYNALANLGEGQRPDLSAIKVCISGGAPLPIEVRHAFETNTGAKLVEGYGLSEASPIITCNPFDGVNKEGSAGLPFPGTTIEIRDREDPSRIMPKGEKGEICARGPQVMKGYWHKPAETDAAFADGALRTGDVGYLDDDGYLFIVDRIKDMILCGGYNVYPRVIEEALYEHPAVVEAVVIGVPDAHRGQAPKAFVVLSEPGQRDGRRPARLPCATRSARSSFPARSKSATVCPRR 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000281g0016 494 ProSitePatterns Putative AMP-binding domain signature. 164 175 IPR020845 -
Bisa1000281g0016 494 Gene3D - 1 408 IPR042099 -
Bisa1000281g0016 494 SUPERFAMILY Acetyl-CoA synthetase-like 4 463 - -
Bisa1000281g0016 494 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 458 - -
Bisa1000281g0016 494 Pfam AMP-binding enzyme C-terminal domain 423 461 IPR025110 -
Bisa1000281g0016 494 Gene3D - 409 486 IPR045851 -
Bisa1000281g0016 494 CDD FC-FACS_FadD_like 1 458 - -
Bisa1000281g0016 494 Pfam AMP-binding enzyme 5 412 IPR000873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000281g0016 2 440 Monolignol Biosynthesis Gene Families AT3G21240 32.892 2.43e-67 223