Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000257g0022 ATGTCTGATCGCCAGCATTCGTCGAACTCTGCCGTCGTCGAGGACGACGACGTGCTGCAGTTTCTGGACGACCCCGAGACCGCCCGCGAGATTCCGCCCACGGCCCATCCGTGGCGAGTGCTCATCGTGGACGACGACACCGACGTCCACAAGGCCACCGAACTCGCCATGCAGGGCCTGATGGTCGAGGGCCAGCCCTTGACCTTCCTCCATGCCCGCTCCGCCCAGGAAGCCGAGCGCCTGCTCTCCCGCGAGCAGGACATTGCCGTGGTGCTGCTGGATGTGGTGATGGAGTCGGACGACGCTGGTTTGCAGCTGGTGCGCTACATCCGCGATGAACTTCAGCTGCAGGCCGTGCGCATCGTGCTGCGCACCGGGCAGCCGGGGTATGCGCCGGAGATCGAAACGATCCAGGCCTATGACATCAACGACTACAAGACCAAGTCGGAACTGACCCGGACCCGTCTCTACACCGTGCTCACGGCCGCGATCCGCTCCTACCGGCAGATCCGCGCCCTGGAAGCCAGCCGGGAAGGCATGGAGATGATCGTGGAGGCCAGCGCCGAACTCGGCCGGCTGCGCGGCATGCAGGGCTTCGCCGAAGGCGTGATCACCCTGCTCAGCGCCTTGCTCGGCACGCTGCCGGACGGACTCGTCTGCATGCAGAGCGAGAACGATCCCAGCGGCGAAGCCCGGGTGATCGCTGCGGCGGGTCAGTACACCTCGCTGCTGAGCCGGCCGCTGCGGCATGTACCGGTGCAGCGGGTGCGCGAGCTGCTGAGCCGCTGCTTTGTGCTGGCCGACCATTTCAATGACGACGGCTGCACCCTGATGTACTTCGGCCTGCCCAATGGGCGGGCGATGGTGGTGATGCTGGAAGTGCCCCGTCCGCTCAGTGAGCTGGATCTGGCACTGCTGCGCGCGTTCAGCTCCAACATTGCGGCGGGTTTCGAGAATGTGGTGCTTTACAGCCAGCTCTCGGACCAGGCGTACAACGACCCCTTGCTGCAACTGCCCAACCGCACCCGGTTCATCGAGGTGCTGGAGCAGAACCTCAAGTCGCCGGACGGCATCACGCTGGCGCTGATCGACCTGGACGACTTTGCCGACATCAATGATGCCTTCGGCCATCGCTTTGGTGATCTGGTGTTGCAGGCGGTCACCTTGCGGATGGCGGGACAGCTCGGCCACAACACGGCCATGGCGAGGATTTCGTCCAATGCCTTTGGTCTGCTGGGACCGGAAGAAGTGGTCAATGGCGACCGCATTGCCGAGCTGTTCAACGATCCGTTCACCGTGTCCGGCGAGCGTCTGCAGCTCAGTGCCACCACTGGCCTGGTGAGGCTGGCGGAGTCACGGGCGCTGGGCTCGGAGTTGCTGCTGGATGCGCAGATTGCACTGAAGCGGGCCAAGGCCGTCAATCGCGGCGCCTCGCAATACTTCCGCGCGGAGATGGGCATTGATGCGCGTGAGCGCTTCAAGCTGCTCAAGGGTCTGCGAGCCAGCTTCGAAGAACGGCGGCTGTTTGTCGTCTATCAGCCGCAGGTGGAGCTGGCCACGCAGCAGGTGATTGGCGCCGAGGCGCTGCTGCGCTGGCGCACCTCGGACGGCCAGTTCGTGCCGCCGGACCAGTTCATTCCGCTGGCGGAGCAATCCGGCCTGATCGTGCCGATTGGCGAGTTTGTGCTGCGGACCGCGTGTTTCCAGATTGCGCAACTGCGGCGCAATGGTTTTCACGACTTCCGGATCGCGGTGAACATCTCGCTGGCGCAATTCCGCCATCCGGGCTTCATTGATTCGATTCGCCGTGCATTGACCGATGCCGAGATCCCTGGTGCCGCACTGGAACTGGAGATCACGGAGTCGATGGCGATGGAAGAGATTTCCACCGTGCTGCGTGTGCTGGCGGAGATCCGCAGCACCGGCGCGACGGTGGCGATTGATGATTTCGGCACCGGCTTCTCGTCTCTGAGTCAGCTGCGCCGACTCGATGTCGAGCGCCTGAAGATCGATCGTGCCTTTGTGCATGAAGCGCAAAGCAGCGCGGCTGGCGCCACGATTGCGCAACTGGTGGTGAACCTCGGCTGCAGCCTCGGCATGCGCGTCGTCGCTGAGGGCATCGAAACCGAGGAGCAGCGCCAGCACCTGTTGGCGCTGGGCTGCCACGAGGGCCAGGGCTGGCTCTTCGCCCGCCCCATGCCCGCCGATCAGCTCGAAGACTGGCTCCGCAACCGTCCCAGCCAATCAGCCTGA 2253 0.6431 MSDRQHSSNSAVVEDDDVLQFLDDPETAREIPPTAHPWRVLIVDDDTDVHKATELAMQGLMVEGQPLTFLHARSAQEAERLLSREQDIAVVLLDVVMESDDAGLQLVRYIRDELQLQAVRIVLRTGQPGYAPEIETIQAYDINDYKTKSELTRTRLYTVLTAAIRSYRQIRALEASREGMEMIVEASAELGRLRGMQGFAEGVITLLSALLGTLPDGLVCMQSENDPSGEARVIAAAGQYTSLLSRPLRHVPVQRVRELLSRCFVLADHFNDDGCTLMYFGLPNGRAMVVMLEVPRPLSELDLALLRAFSSNIAAGFENVVLYSQLSDQAYNDPLLQLPNRTRFIEVLEQNLKSPDGITLALIDLDDFADINDAFGHRFGDLVLQAVTLRMAGQLGHNTAMARISSNAFGLLGPEEVVNGDRIAELFNDPFTVSGERLQLSATTGLVRLAESRALGSELLLDAQIALKRAKAVNRGASQYFRAEMGIDARERFKLLKGLRASFEERRLFVVYQPQVELATQQVIGAEALLRWRTSDGQFVPPDQFIPLAEQSGLIVPIGEFVLRTACFQIAQLRRNGFHDFRIAVNISLAQFRHPGFIDSIRRALTDAEIPGAALELEITESMAMEEISTVLRVLAEIRSTGATVAIDDFGTGFSSLSQLRRLDVERLKIDRAFVHEAQSSAAGATIAQLVVNLGCSLGMRVVAEGIETEEQRQHLLALGCHEGQGWLFARPMPADQLEDWLRNRPSQSA 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000257g0022 750 ProSiteProfiles GGDEF domain profile. 356 483 IPR000160 -
Bisa1000257g0022 750 Pfam Domain of unknown function (DUF3369) 160 326 IPR021800 -
Bisa1000257g0022 750 CDD EAL 499 737 IPR001633 -
Bisa1000257g0022 750 ProSiteProfiles Response regulatory domain profile. 39 163 IPR001789 GO:0000160
Bisa1000257g0022 750 Pfam Diguanylate cyclase, GGDEF domain 330 475 IPR000160 -
Bisa1000257g0022 750 SUPERFAMILY CheY-like 36 182 IPR011006 -
Bisa1000257g0022 750 ProSiteProfiles EAL domain profile. 492 746 IPR001633 -
Bisa1000257g0022 750 Gene3D - 324 493 IPR043128 -
Bisa1000257g0022 750 NCBIfam diguanylate cyclase (GGDEF) domain 327 479 IPR000160 -
Bisa1000257g0022 750 SMART REC_2 38 164 IPR001789 GO:0000160
Bisa1000257g0022 750 Gene3D EAL domain 494 749 IPR035919 -
Bisa1000257g0022 750 Gene3D - 39 246 - -
Bisa1000257g0022 750 Pfam EAL domain 499 732 IPR001633 -
Bisa1000257g0022 750 CDD REC 41 148 - -
Bisa1000257g0022 750 SUPERFAMILY Nucleotide cyclase 337 481 IPR029787 -
Bisa1000257g0022 750 SUPERFAMILY EAL domain-like 498 745 IPR035919 -
Bisa1000257g0022 750 SMART duf2_2 491 737 IPR001633 -
Bisa1000257g0022 750 SMART duf1_3 319 481 IPR000160 -
Bisa1000257g0022 750 PANTHER CYCLIC DI-GMP PHOSPHODIESTERASE PDEF 176 747 - -
Bisa1000257g0022 750 CDD GGDEF 333 476 IPR000160 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa1000257g0022 EAL 1.3e-72 CL0276