Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000224g0014 ATGAGCGCCACCTCCGCCTCGCCAGCCGCTGCCTCGCAGGCGCCGCGCCAGCGGCGCAACGACGACCTCGCCGATGTGATCCGCGACCCCACGCTGGGGGGCACTTACGTCGTCCCCTTTTCCCATGTCGACCCGCACGCGGCGATGCGGGCAGTGCGCACGGCGCTGGGCGGGGCGGCCATCAGGCGCTCAGCGCTTGGCATCCACCTCAAGCCCCAGGACGCCGAGGCCCTGCTGGCGGCCGAAGCCGCGTTGCCGTTCCGGTGGACGGAGGACGCGCGGCGCTTCGTGGCCAACCGTGCACGGGCCCGGGCCACGGTGCCGGCTGTGTGGGACCGCGTGGAATCCCTGCGCAGCGGCGGCGTGGCGGTGGCGATTGCCCAGCTCGGGAACCGAAAAGACCTGGCCGCGCTCGATGGCCACCAGCTGGTCAATGTGGCGGCGATGACACTGCCTGGCAGCCCGGGGCTGTGCCTGTTCGATGAACAGGGCGCCGGCAAGACGGTCAGCATGATCTTCGCCTTCGACGAGCTCGTGCGCCGCGACGAGGCAGACTTCATGCTCATCGCTGCACCCAAGAGCATGCTCGGCGAGTGGCCGAAGGATTTCGGCCGCTTCACCGACGACACGTACCAGGTTCGCGTCCTCGACGGCAGCCGAGCCGACAAGATGCGGCAGCTGTCGGCGCCGGCCGACGTGCTGATCGCCAATTTCGAGACCATCGTGTCGATGGAGGCGGAGCTGGAGGCCCGCATCAAGCAGTACGGCGGGCGGGCCGTCATCGCCGTCGACGAATCCTTCTTCATCAAGTCGCCTGACGCACGCCGGACGATGGCGCTGCGGCGGTTGCGCGAGTGGGCCGACCGCGGTTTCGTGCTGTGCGGCACGCCGGCGCCCAACTCGCCCTCCGACGTGGTCCAGCAGTTCAACTTCGCCGACTTCGGCTATGCCTTTGAGGGCGCCGAGCTGCCCGAGGATCACGGACGACCGGACCATGGTGATGGTCGCCAACCCGGCGGCGGCTGGTGCGGGCCTCACCCTGCACCGGGCCCGGTTTGCGGTGTACGAATCGCTGTCCAACCAGGCGGCGCACTACCTGCAAAGCCTGGACCGCATCCATCGCCGCGGCCAGGCGCGGCCCGTCGAGTACATCGTGCTGCTGTGCCAGGGCTCCATCGAGGAGGAGGAGTACAGCCGGCTCCTACGGAAGGAAGCTGCGGCCCAGAACCTGTTGGGCGACGTGGTCGAGCCTCCCCTCGAGCGGGCTGCGATGTTGGCGGAGACGCTGGCGCTGCTGCAGGCGGGACAGGGCGGCAACAGCGTGCCTATTGCGACTTGAGGGAGGCTGGGATGTCATTGGCACAAACCGAACAACAACTCGTCAAGCTGTTGGCAAACGCGGACAACAAGGTGGTCGCGCTTTCAGGTAGGTGGGGGACGGGGAAGAGCCACCTGCTGGACAAGGTCCGCAAGGGCTCCAGCGATGAAAAAGTGCGCACGGCCGCCTACGTGTCCCTTTTCGGGCTAGCCGACATGGCCGAGGTCAAGCTCAAGCTGTTGCAGTCAGCGCTACCCAAGGCCGAGGACAAGGGGTCGGCATGGAAGAAAGTATCCAGCGGCTGGAACGCGGCGAAGACCGCCCTCGTTGGGGTCAACAAGGGCTTCTCCGTCCTGGAAGAGCTGCAGTTGCTCGCAGTGCCCATCCTGCTCAAGGGCAAGGTCATCGTGCTGGACGACATCGAGCGCAAGCACAAGGATCTCAGCATCGACGGGATCCTGGGGTTCATCGACGAGTTCACCAGGGAATACGGGTGCAGGTTCATCCTGGTCCTCAACAGCGACCAGCTCCAGCACCGGGACACTTGGGAGACGCTGCGCGAGAAGGTGGTCGACCAAGAACTGAGGTTGGATACGTCGCCCGAGGAGGCCTTCCGCATCGCGGCGGACCAGATCCCGCCGGCCTACCCCGACCCGGTCCGCGAGGCTGTCGAGGCGTGCGGCCTGACGAACATCCGCATCATCCGCAAAGTCATCAAGGCCACCAACAGCGTCATCGGGCAGAGGCAAGGCCTGGCACCCGCGGTGCTTTCGCGGATCATCCCTTCAACCGTACTGCTCGCCGCCATCCACTACCGCGGCATCGCTGACGGTCCGGACTTCCAGTTCGTGTTGGCCAGGCGGGAGGCAGACGATTTCTCGGCTTTCCTCGGGGAGCGCGCCAACGAGCAGGAGGCCCCCACCGACGAGTCCAAGCGCCGCTCACGATGGAGGCTGCTGATGGCCGAACTGGGCATCGCCCGGTGCGACGAATTCGAGCTCCTCGTGGTGGAGTACCTTGAATCCGGCCTGTTCGACCCAGGAGCCGTCTCCGCCTTGATCGACCGCTATATCGGCGAAGCCGGCACGCTGGAGGCCCAGGAAGCCGCGAGCCGGTTCATCAAGACGGCCACCTGGGACTTCCGGCCTTCTGTTGCTGAGTTGCTCGACCAGGCCAGGACGCTGGTCGCTGCAGCGCCGCTTCTGGACCCCTACCATGTCAGCGCCCTGGCGGAGATGGTGCATTCGCTCGGAGGCGATGGCCCCGGCTTGGCGCTGGCGATGGTGGAAGCTTGGGTCGCAACGTTCCGCCAGCATGGCCGTGGATTGCCGGAAGAACGGACCCTCCACCGCCCGGTCCACCCTCTCATCCAAGCCGAATTCGACCAGGCAGAACAGGCGCAGCAAGCGGCGGTCACGGTTTTCGATGCAGTCATGCATATCGCGCGGCACAGCGGTTGGGGTGCGCGGCAAGAGCTTGCACTCAACAATGCATCGGCAGCCGACTATGAGGCGGCGATGCTGGGCTTGCCGGTCGATGACTTCCGCCGGTTCCTGTCCCAGATGCTCCGGCTTTGCGCGCCGGGACAACCGTACTTGCACCACTTCGGCGCCGGGGTCGCGGCGTTCAAGGCCGCGAGCACTGGGATCGTGGAGCGCAACGACCCGCCCAGGCTGGCCGCTTTGCTGAAGCGGCTCTTCCGCGAAAGCGGGCTTGGTGAGCTCCCGCCTGATGCGGTGCCGGCCGCTGCCGCAGCGGGGGGCGCTTGA 3087 0.6663 MSATSASPAAASQAPRQRRNDDLADVIRDPTLGGTYVVPFSHVDPHAAMRAVRTALGGAAIRRSALGIHLKPQDAEALLAAEAALPFRWTEDARRFVANRARARATVPAVWDRVESLRSGGVAVAIAQLGNRKDLAALDGHQLVNVAAMTLPGSPGLCLFDEQGAGKTVSMIFAFDELVRRDEADFMLIAAPKSMLGEWPKDFGRFTDDTYQVRVLDGSRADKMRQLSAPADVLIANFETIVSMEAELEARIKQYGGRAVIAVDESFFIKSPDARRTMALRRLREWADRGFVLCGTPAPNSPSDVVQQFNFADFGYAFEGAELPEDHGRPDHGDGRQPGGGWCGPHPAPGPVCGVRIAVQPGGALPAKPGPHPSPRPGAARRVHRAAVPGLHRGGGVQPAPTEGSCGPEPVGRRGRASPRAGCDVGGDAGAAAGGTGRQQRAYCDLREAGMSLAQTEQQLVKLLANADNKVVALSGRWGTGKSHLLDKVRKGSSDEKVRTAAYVSLFGLADMAEVKLKLLQSALPKAEDKGSAWKKVSSGWNAAKTALVGVNKGFSVLEELQLLAVPILLKGKVIVLDDIERKHKDLSIDGILGFIDEFTREYGCRFILVLNSDQLQHRDTWETLREKVVDQELRLDTSPEEAFRIAADQIPPAYPDPVREAVEACGLTNIRIIRKVIKATNSVIGQRQGLAPAVLSRIIPSTVLLAAIHYRGIADGPDFQFVLARREADDFSAFLGERANEQEAPTDESKRRSRWRLLMAELGIARCDEFELLVVEYLESGLFDPGAVSALIDRYIGEAGTLEAQEAASRFIKTATWDFRPSVAELLDQARTLVAAAPLLDPYHVSALAEMVHSLGGDGPGLALAMVEAWVATFRQHGRGLPEERTLHRPVHPLIQAEFDQAEQAQQAAVTVFDAVMHIARHSGWGARQELALNNASAADYEAAMLGLPVDDFRRFLSQMLRLCAPGQPYLHHFGAGVAAFKAASTGIVERNDPPRLAALLKRLFRESGLGELPPDAVPAAAAAGGA 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000224g0014 1028 MobiDBLite consensus disorder prediction 391 422 - -
Bisa1000224g0014 1028 MobiDBLite consensus disorder prediction 1 22 - -
Bisa1000224g0014 1028 Pfam KAP family P-loop domain 459 497 IPR011646 -
Bisa1000224g0014 1028 PANTHER SNF2/RAD54 HELICASE FAMILY 158 311 - -
Bisa1000224g0014 1028 Pfam SNF2-related domain 153 312 IPR000330 GO:0005524|GO:0140658
Bisa1000224g0014 1028 Gene3D - 141 335 IPR038718 -
Bisa1000224g0014 1028 Coils Coil 510 530 - -
Bisa1000224g0014 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 679 IPR027417 -
Bisa1000224g0014 1028 MobiDBLite consensus disorder prediction 323 347 - -
Bisa1000224g0014 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 320 IPR027417 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bisa1000224g0014 SNF2_N 1e-13 CL0023