Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000224g0006 ATGTTCATCGGCGGCCTGCTGCTGAGCATGGGGCTGCTGGCCCTGGTGCTGGCCTTGCTGGCTCAACCCTTCAACCGGCATCTGCTGGACGTGGGCGTGCAGCACTGGACCTCCGAGGTCTCTGCATTTGTCCGGCTCGATGCGCAGGGACGGCCGGTGGGCATCGATGATCAGCACATTGAACCCTGGTTGTTCAGCAGCCTGTCCGAAGAAGCGACGCTGCGGATCGTGGACGCGCAGGGGCGGGTGGCCTACAGCTCGGAGCGTGGCGACCTGTCGCCGCTGACGGCGGACGGCGCGGCCTTCGACGTCACCCGCCAGGTCCTCACCCTGACGCGGGATGGGGTGCCGATGCATGCGGCCACGATGCCGGTGAAACAATCGCAAGGCCGCTGGTGGCTGCAGATGGCCATCAGTGATCGCATCGTGACGCGCATGCGCGCGACCTTCGGCACGCCGGCCCTGATGAAGGGCGTGGTGGGCACCTGTGTGGTGTTCATGCTGATCTTTTTCCTCACGGTGCATTTGACCCTTCGCAGGGCCCTGCAGCCCTTGCGCGAAGCGTCGGCCGAGGCGCGACGCATCACGCCGAGGACGCTGGATCAGCGCCTGTCTGCGGATGTGCATCCGCGCGAGATCCGGCCGCTGGTGCAGGCCTTCAACCAGACGCTGGACCGGCTGCAGCATGGCTTCCGGACGCAGCAGGAGTTCCTGTCCAGCGCGGCGCATGAACTCAAGACGCCGCTGGCGCTGATCCGGGCGCAGGTGGAACTGGGGCCGGACGACGAACGACGGCGTTACCTGCTGGAGGATGTGGACCGCATGGCGCGCCAGGTGCAGCAACTGCTGATGCTGGCGGAGGTGAGCGAGCCGCAGAACTACCGGATGGAGGCGATCGACCCGCGCGGCACGCTGCAGGAGGTGTTCGACTACATGGGCCGGGTGGCGGAGCGTCATGGGGTGCTGCTGGGCCTGCGCATGGCAGACGACCTGCGGCAGTGGCAGGCGGACCGGGGCGCGCTGTTCACCCTGATGAAGAACCTGCTGGAGAACGCGATCCAGCACAGCCCGCCGGGCGGTGTGGTGGTGCTGGCGGTGCAGGCGGACCGGTGTGTGGTGCGGGATGAAGGACTGGGCGTGCCGGAAGAGCATCTGCGGCGGCTGTTCGAGCGCTTCTGGCGGGGACCGGAGCGGCGAGAAGAGGGCGCCGGGCTGGGCCTGTCCATCTGCCGGGAGATTGCCCTGGCACACCGATGGCGGCTGACGGCGCGCAATACCGGGCGCGGGCTGGAGATGGCGCTGGACCTTGGGCAGGCGGAAGCACCGGAAGACGGCGGGGCCGGGTGGGAGTCCGGCGAGCCGGCGTCGGAAGCGCCGCGGCGGATGCCGCCGGTGAGGGTGCAGTCGACGTCGCCTGGGAAGGCGATGCTGAATGCGCTGTTTTGA 1446 0.6833 MFIGGLLLSMGLLALVLALLAQPFNRHLLDVGVQHWTSEVSAFVRLDAQGRPVGIDDQHIEPWLFSSLSEEATLRIVDAQGRVAYSSERGDLSPLTADGAAFDVTRQVLTLTRDGVPMHAATMPVKQSQGRWWLQMAISDRIVTRMRATFGTPALMKGVVGTCVVFMLIFFLTVHLTLRRALQPLREASAEARRITPRTLDQRLSADVHPREIRPLVQAFNQTLDRLQHGFRTQQEFLSSAAHELKTPLALIRAQVELGPDDERRRYLLEDVDRMARQVQQLLMLAEVSEPQNYRMEAIDPRGTLQEVFDYMGRVAERHGVLLGLRMADDLRQWQADRGALFTLMKNLLENAIQHSPPGGVVVLAVQADRCVVRDEGLGVPEEHLRRLFERFWRGPERREEGAGLGLSICREIALAHRWRLTARNTGRGLEMALDLGQAEAPEDGGAGWESGEPASEAPRRMPPVRVQSTSPGKAMLNALF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000224g0006 481 PRINTS Bacterial sensor protein C-terminal signature 387 397 IPR004358 GO:0016310|GO:0016772
Bisa1000224g0006 481 PRINTS Bacterial sensor protein C-terminal signature 401 419 IPR004358 GO:0016310|GO:0016772
Bisa1000224g0006 481 PRINTS Bacterial sensor protein C-terminal signature 369 383 IPR004358 GO:0016310|GO:0016772
Bisa1000224g0006 481 Gene3D - 177 286 - -
Bisa1000224g0006 481 CDD HisKA 232 286 IPR003661 GO:0000155|GO:0007165
Bisa1000224g0006 481 SMART HKATPase_4 336 440 IPR003594 -
Bisa1000224g0006 481 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 423 IPR003594 -
Bisa1000224g0006 481 SMART HisKA_10 233 291 IPR003661 GO:0000155|GO:0007165
Bisa1000224g0006 481 PANTHER SENSOR HISTIDINE KINASE YKOH 33 439 - -
Bisa1000224g0006 481 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 294 430 IPR036890 -
Bisa1000224g0006 481 Pfam His Kinase A (phospho-acceptor) domain 234 283 IPR003661 GO:0000155|GO:0007165
Bisa1000224g0006 481 Gene3D - 295 444 IPR036890 -
Bisa1000224g0006 481 CDD HAMP 182 227 - -
Bisa1000224g0006 481 SMART HAMP_11 179 232 IPR003660 GO:0007165|GO:0016020
Bisa1000224g0006 481 Pfam HAMP domain 177 229 IPR003660 GO:0007165|GO:0016020
Bisa1000224g0006 481 ProSiteProfiles Histidine kinase domain profile. 240 440 IPR005467 -
Bisa1000224g0006 481 MobiDBLite consensus disorder prediction 439 473 - -
Bisa1000224g0006 481 ProSiteProfiles HAMP domain profile. 179 232 IPR003660 GO:0007165|GO:0016020
Bisa1000224g0006 481 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 216 289 IPR036097 GO:0000155|GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000224g0006 214 413 Histidine Kinase Gene Family AT5G10720 24.380 4.83e-08 53.9