Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000224g0005 ATGAACCGCATCGCCCTGGTCGAGGACCATGGCCGCCTGGCGGCACTGGTCCGCCAGAGCCTGCAGGCCGCCGGCATTCCGACGGATGTGTTCCCGACGCTGGAGGCGGCCTGGCAGGGGATGCAGGCCATTGACTATGCGGCCCTGGTGGTGGACCGGGGCCTGCCGGACGGCGATGGACTGAACCTGGTGCGGCGTCTCCGTGCGGCGGGCACCGCGACGCCCTGTCTGATGCTCACCGCCCGGGATGCGCTGCATGACCGGCTGGAGGGGCTGGACTCCGGCGCGGACGACTACCTCACCAAACCCTTCCCCATGGAGGAACTGGTGGCGCGCGTGCGGGCGCTGCTGCGGCGTCCGGCCGCGCTGCAGCCGGACCGGCCGGCCTTCGGGGACATCCACCTCCAGATGGAAGAAGGACGGCTGGGATGCGGAGACGAGTCGATCAGCCTCTCGCCGAGCGAACAGCAGATCCTGCTCACGCTGGTGCGCCAGGAGGGCCGGACCGTCCGCCGCGGTGCGCTGGAGGCGGCGGCCTGGGGCCTGTCCGAAGCGGTCACGCCGAATGCGCTCGATGTGGCGCTGCACCGGCTGCGTCGCAAGTTGCTGGGCATCGGGTCGCGCCTGCAGATCGTCAACATCAGAAATCAGGGCTATGCGCTTCGGGAAGATGATCCGCCCCTCTAG 687 0.6987 MNRIALVEDHGRLAALVRQSLQAAGIPTDVFPTLEAAWQGMQAIDYAALVVDRGLPDGDGLNLVRRLRAAGTATPCLMLTARDALHDRLEGLDSGADDYLTKPFPMEELVARVRALLRRPAALQPDRPAFGDIHLQMEEGRLGCGDESISLSPSEQQILLTLVRQEGRTVRRGALEAAAWGLSEAVTPNALDVALHRLRRKLLGIGSRLQIVNIRNQGYALREDDPPL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000224g0005 228 Gene3D - 82 119 - -
Bisa1000224g0005 228 ProSiteProfiles OmpR/PhoB-type DNA-binding domain profile. 125 223 IPR001867 GO:0000160|GO:0003677|GO:0006355
Bisa1000224g0005 228 PANTHER REGULATOR OF RPOS 1 224 IPR039420 -
Bisa1000224g0005 228 SUPERFAMILY CheY-like 3 119 IPR011006 -
Bisa1000224g0005 228 SUPERFAMILY C-terminal effector domain of the bipartite response regulators 120 222 IPR016032 GO:0003677|GO:0006355
Bisa1000224g0005 228 ProSiteProfiles Response regulatory domain profile. 3 117 IPR001789 GO:0000160
Bisa1000224g0005 228 CDD trans_reg_C 145 221 IPR001867 GO:0000160|GO:0003677|GO:0006355
Bisa1000224g0005 228 Gene3D - 1 81 - -
Bisa1000224g0005 228 Pfam Response regulator receiver domain 4 114 IPR001789 GO:0000160
Bisa1000224g0005 228 SMART REC_2 2 113 IPR001789 GO:0000160
Bisa1000224g0005 228 Gene3D - 125 226 IPR036388 -
Bisa1000224g0005 228 Pfam Transcriptional regulatory protein, C terminal 147 221 IPR001867 GO:0000160|GO:0003677|GO:0006355
Bisa1000224g0005 228 SMART Trans_reg_C_3 146 221 IPR001867 GO:0000160|GO:0003677|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa1000224g0005 Response_reg 2e-21 CL0304