Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000219g0018 ATGGACCAGAGCCTGCAGGAGCGCCTGCGCCTCGTGCTGGAGCAGCAGCGCGCCGCATTCGATGCGAACCGCATGCCCAGCCTCGCCGAGCGGCGTGACCGCCTGGAGCGCCTGGGCCGTCTCACCACCACCCATCGCGCCGCATTGCAGGCCGCCATGGCGCAGGACTTCGGCCATCGCGCCCACCAGGAAAGCCTGCTGGCCGACATCTTCACCGTGGAATCCGGTGTCCGCCATGCGCTGAAGCATCTGAAGTCCTGGATGGCAACGAAACGCGCGCCCACCGCGCTGCATTTCCTGCCCGGCCGCAACCGGTTGATGCCGCAACCGCTGGGCGTGGTGGGCATCGTCTCGCCCTGGAACTATCCGTATTACCTGGCGATGGCACCGGCCCTCGCGGCGCTGGCTGCCGGCAACCGGGTGATGATCAAACCCTCGGAACTGACGCCCGCCACCTCCGCGCTGATGGCGCGTCTGGTGGCCGAGCACTTTGCGCCGGAAGAGATGACGGTGCTGACCGGCGATGCCGACGTCGGCCGCGCCTTCACCGAACTGCCCTTCGACCATCTGTTCTTCACCGGCTCCACCCCGGTGGGCCGGGTGGTGGCGCAGGCAGCAGCGCGGAACCTCACACCGGTCACGCTGGAACTGGGTGGCAAGTCTCCGGTGGTGATCGACCGCAGCGCTGATCTGGCGCAGGCTGCCGAACGCATTGCCTTCGGCAAGCTGCTCAATGCAGGGCAGACCTGTGTGGCGCCGGACTATGCACTGGTGCCCCGCGAGTCGGTGGCCGCCTTCACCGAGGCGGTGCTGGCCGCCATCCGGCGCCTCTATCCGCAGATCGATGGCAACCCCGACTACACCGCCATCGTCAGCCCGCGCCACCATGCCCGCCTGCTGGCCCTGGTGGAAGAAGCGCGGCAACAGGGCGCCACCGTGCGGCGCAGCCATGACGAGTCCCCGCAGGACCGCCGTCTGGTGCCCACCGTGCTGCTGGACACCCGCGCCACCATGACGGTGATGCGGGAAGAGATCTTCGGGCCTTTGCTGCCCATCGTGCCTTACGACCAGCCGGCGGACGCGGTGCGCCACATCAATGCCGGCGACCGTCCGCTGGCGCTGTACTGGTTCGGCCGCGACGATGCGGCCCGCGATCAGGTGCTCGCGCAGACCCATGCCGGCGGCGTGACCATCAACGACTGCCTGTGGCACCTGGGTCAGGAAGAGCAGCCCTTCGGCGGCGTGGGCGCCTCCGGCATGGGGGCCTATCACGGCGTGTGGGGCTTCAATACCTTCAGCAAGCTCAAGCCGGTGTTCTATCAGTCCGCCCTGGCGGGCACGCGGCTGTTCTATCCGCCGTACGGGCCGCGCTTTGACCGGCTGATGGCGCTGATGCGCAAGATCGCCTGA 1410 0.6837 MDQSLQERLRLVLEQQRAAFDANRMPSLAERRDRLERLGRLTTTHRAALQAAMAQDFGHRAHQESLLADIFTVESGVRHALKHLKSWMATKRAPTALHFLPGRNRLMPQPLGVVGIVSPWNYPYYLAMAPALAALAAGNRVMIKPSELTPATSALMARLVAEHFAPEEMTVLTGDADVGRAFTELPFDHLFFTGSTPVGRVVAQAAARNLTPVTLELGGKSPVVIDRSADLAQAAERIAFGKLLNAGQTCVAPDYALVPRESVAAFTEAVLAAIRRLYPQIDGNPDYTAIVSPRHHARLLALVEEARQQGATVRRSHDESPQDRRLVPTVLLDTRATMTVMREEIFGPLLPIVPYDQPADAVRHINAGDRPLALYWFGRDDAARDQVLAQTHAGGVTINDCLWHLGQEEQPFGGVGASGMGAYHGVWGFNTFSKLKPVFYQSALAGTRLFYPPYGPRFDRLMALMRKIA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000219g0018 469 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 219 418 IPR016163 GO:0016620
Bisa1000219g0018 469 CDD ALDH_CALDH_CalB 12 440 - -
Bisa1000219g0018 469 Pfam Aldehyde dehydrogenase family 7 437 IPR015590 GO:0016491
Bisa1000219g0018 469 PIRSF ALDH 1 469 IPR012394 GO:0006081
Bisa1000219g0018 469 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 17 436 IPR016162 GO:0016491
Bisa1000219g0018 469 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 215 222 IPR029510 GO:0016491
Bisa1000219g0018 469 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 243 254 IPR016160 GO:0016491
Bisa1000219g0018 469 PANTHER ALDEHYDE DEHYDROGENASE 7 463 IPR012394 GO:0006081
Bisa1000219g0018 469 SUPERFAMILY ALDH-like 9 441 IPR016161 GO:0016491
Bisa1000219g0018 469 FunFam Aldehyde dehydrogenase 17 223 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000219g0018 62 454 Aldehyde Dehydrogenase Gene Family AT1G44170 39.196 1.37e-100 306