Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000219g0014 ATGCCTCGCTGCTCGCCCTGGACGGCTGGTATGCCAGCCAATGGCGCTATCAACAACTGGAGGCGAGCCTTGACGCAGCCTGAGGCCCGGGACGGCGCGTCCGACCGGCAGACGCAAGAACATTCCCCCCGCGAGGCGCTGGCCCTGCTGGCACAGGCCGCTGCGCCGGAACGCCGCGGCCTGATGAAGGGCCTGGGCTGGCTGACCGTGGCCGCGGCGCTGGAAGCGATCGGCCCCATCCTGGGCAAGCACTTCATCGACAACCATGTGCTGCCGCGGCAGTTCGACCTCGGTGCCATGGCTGGTCTGCTGGGCGCGATGCTGCTGGCCGGCTGGGTGGCCAGCCTGACGCGGTATGCGCAGCTGCGCCGCATGGCGGCGGTGGCACGGCGCTCGGTGCTGCGACTGCGCGAACAGGTCTATGCGCATGTGATGGCCCAGCCGATGGCCTTCTTCGACCGCAGCATCACCGGGCAACTGCTCAGCCGCATCACCAACGACACCGATGCGGTGAACAACCTCTACCGGCAGGTGCTGTTCGTGATGCTGGATTCCAGCATCGTCGTGCTGGGGGCGCTGGTGGCCATGGCGTGGCTGGACTGGCGGCTGATGCTGATCGTGCTGGCGCTGGTGCCGGCCAGCTCCGGCATCATCTGGCTGTATCAGCGTGCCAGCAGCGGGCCGGTGCAGCGGGCCCGCGCGCTGCGGGCCGACCTCAATGCGCAGATGGCCGAGAGCATGGCGGGCATGGCGATGCTGCAGTCGGCCGGCGCCACGGCGCGCTTCGCGCAGCGGTATGAAGCGGTGAACCAGGCGCAGCTGCGGGCACGGGTGCAGGAGCTGCGGGCCAACGCCTGGCTGCTGCGTCCGGCCCTGGACCTGCTGAATGTGCTGCTGATCGTCACCGTGATCTTCGGTTTTGGTCAGCGGGAGCTGTCCGGCGTGGAGGTGGGGCTGCTGTATGCCTTCCTGGCCTACATCGCGCGGGTGGTGGAGCCGCTCATCCAGATCACGATGCAGTTCAGCCAGCTGCAGCAGGCGTTGGTGGCGGCTTCACGGGTGCGAGCGCTGCTGCGCGAGCCGGTACCGGCCAAGGACCAGCGCGCCGAGCTGACGGTGCCGCATGGGGCGATTCACTTCGACCATCTGAGCTTCGGCTACAAGCCCGATCATCTGGTGCTGCAGGACCTGGCTCTGAAGATCGAGGCCGGCAGCTTCGTCGGCATTGCGGGCCATACCGGGTCGGGCAAGTCGACGCTGCTGGCGCTGCTCCTGCGTTTTTATACGCCGCGCACCGGTCGCATCCTGGTGGACGGTCAGCCGCTGGACCAGTTGCCGGACGAGGCCTTCCATCAGGCGGTGGGTCTGGTGCCGCAGGAGCCGTATCTGGTGGCGGGCACCGTCCGGGACAACATCCGCATGGGCCGCGCCATCAGCGATGAGCGACTGGAGGCGGCGGCCAAGGCGGCGCGGGCGCATGAGTTCCTGGCCGCCCTGCCGCAGGGCTGGGACAGCCGGCTGGGGGATGGCGGTCTGGCGGTGTCCACCGGGCAGAAGCAGTTGATCGCCCTGGCACGCGCACTGGCGGGTGATCCGCGGATCCTGCTGCTGGACGAGGCCACCGCCAACATCGACAGTGCCACCGAGGCGCAGGTCAGCGAGGCGCTTCGCGCGCTGCGCGGACAGGTGACGGTGGTGGCGATTGCGCACCGGTTGTCGACCATCCGCGATGCCGATCAGATCGTCGTGCTGAACCACGGCCGCCTGGCCGAGCGCGGCACGCATGACGCGCTGATGGGTATCGACGGCGGGATCTATCAGCGACTGGTGCAGTTGCAGGCGCTGGAGGACTGA 1854 0.6861 MPRCSPWTAGMPANGAINNWRRALTQPEARDGASDRQTQEHSPREALALLAQAAAPERRGLMKGLGWLTVAAALEAIGPILGKHFIDNHVLPRQFDLGAMAGLLGAMLLAGWVASLTRYAQLRRMAAVARRSVLRLREQVYAHVMAQPMAFFDRSITGQLLSRITNDTDAVNNLYRQVLFVMLDSSIVVLGALVAMAWLDWRLMLIVLALVPASSGIIWLYQRASSGPVQRARALRADLNAQMAESMAGMAMLQSAGATARFAQRYEAVNQAQLRARVQELRANAWLLRPALDLLNVLLIVTVIFGFGQRELSGVEVGLLYAFLAYIARVVEPLIQITMQFSQLQQALVAASRVRALLREPVPAKDQRAELTVPHGAIHFDHLSFGYKPDHLVLQDLALKIEAGSFVGIAGHTGSGKSTLLALLLRFYTPRTGRILVDGQPLDQLPDEAFHQAVGLVPQEPYLVAGTVRDNIRMGRAISDERLEAAAKAARAHEFLAALPQGWDSRLGDGGLAVSTGQKQLIALARALAGDPRILLLDEATANIDSATEAQVSEALRALRGQVTVVAIAHRLSTIRDADQIVVLNHGRLAERGTHDALMGIDGGIYQRLVQLQALED 617
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000219g0014 617 Pfam ABC transporter transmembrane region 70 331 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa1000219g0014 617 FunFam Multidrug ABC transporter ATP-binding protein 369 617 - -
Bisa1000219g0014 617 SUPERFAMILY ABC transporter transmembrane region 50 363 IPR036640 GO:0005524|GO:0016020
Bisa1000219g0014 617 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 64 346 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa1000219g0014 617 SMART AAA_5 403 588 IPR003593 GO:0016887
Bisa1000219g0014 617 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 63 609 IPR039421 -
Bisa1000219g0014 617 Pfam ABC transporter 394 542 IPR003439 GO:0005524
Bisa1000219g0014 617 Gene3D ABC transporter type 1, transmembrane domain 28 362 IPR036640 GO:0005524|GO:0016020
Bisa1000219g0014 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 378 611 IPR003439 GO:0005524
Bisa1000219g0014 617 Gene3D - 372 617 IPR027417 -
Bisa1000219g0014 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 613 IPR027417 -
Bisa1000219g0014 617 CDD ABC_6TM_TmrA_like 64 354 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000219g0014 370 613 Calmodulin-binding Proteins AT2G36910 44.578 5.01e-58 209