Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000175g0057 ATGGGCCGTGATCCAGTCGCGGTTCTCTTCTTTCCAGCTCGCATCGCGCAATTTGCGCCCCGCCTCGCGGATCGCGGCTTCACTGACCTGCGACAGGTTGACGCCGGCTTCCTTCGCCATCGCCACGATACCCGTGTCGAGAGAGAGGTTGACGGGCTTACGCTTGCCGGATGCGATCGGATCGTGCTTCATGCTCATGCCGTAAGATGCGAAGGGGGCAGGGATGAAGCTGGTCATTGCGATCATCAAGCCGTTCAAGCTCGACGAGGTGAGGGAAGCGCTCACCACGTTGGGGGTGGCAGGGATGACGGTTACCGAGGTCAAGGGGTTCGGCCGCCAGAAGGGCCAGACCGAATCTACCGCGGCGCCGAATACAGCACCAACATGGTGCCCAAGATCAAGATCGAGGTGGTGTGCGCCGCCGACCTGGCCGACCGGGTCGTCGAGGCGATCCAGGCATCGGCGAACACCGGCGCGATCGGCGACGGCAAGATCTTCGTGCTCGACGTCGGGCAGGCGGTGCGCATCCGCACCGCGAAACCGACGATTCGGCGCTCTGAGGGGGGTAAGATGAAGCTGACACAGAAAATCGCCGGTGTCGGGGCGGCCTGCGCTGCCGCGGCCTTCACCGCACTGCCGGCCTTCGCCCAGGGCGGCGCCCGCGGCGGCACCCGTCGTCGCGACGGTCAACAAGGGCGACACCGCCTGGATGATGACCAGCACCGTGCTGATCGGCGCGGTCGCGTGCCTCGCGATGCTGATCTGGGTGATGTACGGCTATTCCCTCGCCTTCGGTCCCGACCTTGCCGGTGGCGGGGTGCTGACCAACTTCATCGCCAGCTTCGACAAGGCGTTCCTGAAGGGCGTGACCGCGGCGTCGCAGTCGGCGACCTTCACCGCGGGCGTCGAAATCCCCGAATATGTCTTCATCTGCTTCCAGATGACCTTTGCCGCGATCACCGTCGCGCTGGTGCTGGGATCGGTGGTCGAGCGGATGAAGTTCAGCGCGGTCATGGCGTTCGGCGCCGTCTGGCTGACGATCGTCTACTTCCCGATCGCACACATGGTGTGGGCATCGTCGGGCCTGTTTCTTCAAGGCGGGCGCGCTCGATTTCGCGGGGCGGCACCGTGGTGCACATCAACGCCGGCGTGTCGGCGCTGGTCGCATCGCTGATGCTTGGCAAGCGCATGGGCTATCCCAACACGCCGATGCCGCCGCACTCGCTGACCCTGACGGGCGTCGGCACCGGCCTGCTGTGGGTCGGCTGGTTCGGGTTCAATGCGGGTAGCGCGCTGGAAGCCAATGGCTCGGCGGGCCTCGCGATGATCAACACCTTCGTCGCGACGGCGAGCGGCGGCCTGTTCTGGATGCTGATCGAGCGGGTGGCGCGGTCACAAGGGTCGGCGCTGGGCTTCTGCTCCGGCATCGTCGCCGGCCTGGTCGCGGTGACGCCGGCGGCGGGGCAATTCGGGTCCGTTCGGCGCGATCGTGCTGGGCGCGGTTGCTTCGGTGGTCTGCTTCTTCGCGGTGTCGGTGCTGAAGCCCAAGCTCGGCTATGA 1560 0.6603 MGRDPVAVLFFPARIAQFAPRLADRGFTDLRQVDAGFLRHRHDTRVEREVDGLTLAGCDRIVLHAHAVRCEGGRDEAGHCDHQAVQARRGEGSAHHVGGGRDDGYRGQGVRPPEGPDRIYRGAEYSTNMVPKIKIEVVCAADLADRVVEAIQASANTGAIGDGKIFVLDVGQAVRIRTAKPTIRRSEGGKMKLTQKIAGVGAACAAAAFTALPAFAQGGARGGTRRRDGQQGRHRLDDDQHRADRRGRVPRDADLGDVRLFPRLRSRPCRWRGADQLHRQLRQGVPEGRDRGVAVGDLHRGRRNPRICLHLLPDDLCRDHRRAGAGIGGRADEVQRGHGVRRRLADDRLLPDRTHGVGIVGPVSSRRARSISRGGTVVHINAGVSALVASLMLGKRMGYPNTPMPPHSLTLTGVGTGLLWVGWFGFNAGSALEANGSAGLAMINTFVATASGGLFWMLIERVARSQGSALGFCSGIVAGLVAVTPAAGQFGSVRRDRAGRGCFGGLLLRGVGAEAQARL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000175g0057 519 Pfam Ammonium Transporter Family 374 488 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bisa1000175g0057 519 ProSitePatterns P-II protein C-terminal region signature. 157 170 IPR017918 GO:0006808|GO:0030234
Bisa1000175g0057 519 MobiDBLite consensus disorder prediction 88 116 - -
Bisa1000175g0057 519 SUPERFAMILY GlnB-like 107 180 IPR011322 -
Bisa1000175g0057 519 Gene3D - 104 180 IPR015867 -
Bisa1000175g0057 519 PANTHER AMMONIUM TRANSPORTER MEP2 374 489 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bisa1000175g0057 519 ProSiteProfiles P-II protein family profile. 72 186 IPR002187 GO:0006808|GO:0030234
Bisa1000175g0057 519 SUPERFAMILY Ammonium transporter 374 491 - -
Bisa1000175g0057 519 Gene3D Ammonium transporter AmtB like domains 372 495 IPR029020 -
Bisa1000175g0057 519 Pfam Nitrogen regulatory protein P-II 115 180 IPR002187 GO:0006808|GO:0030234
Bisa1000175g0057 519 MobiDBLite consensus disorder prediction 226 251 - -
Bisa1000175g0057 519 SMART P_II_3 93 179 IPR002187 GO:0006808|GO:0030234
Bisa1000175g0057 519 ProSitePatterns P-II protein uridylation site. 120 125 IPR002332 GO:0006808|GO:0030234
Bisa1000175g0057 519 PRINTS P-II protein signature 126 149 IPR002187 GO:0006808|GO:0030234
Bisa1000175g0057 519 PRINTS P-II protein signature 157 177 IPR002187 GO:0006808|GO:0030234
Bisa1000175g0057 519 MobiDBLite consensus disorder prediction 218 251 - -
Bisa1000175g0057 519 MobiDBLite consensus disorder prediction 88 102 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000175g0057 373 488 Inorganic Solute Cotransporters AT2G38290 37.069 2.81e-13 69.3