Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa1000157g0047 ATGCTGAGCCGCCTCTCCAACACCCTGCGGCACACCCTGCAGCACAGCGCCAAGGAACGTGTGCCGCTGGCGGACGAATTGAAGGTCGTGCGTGACTATGTGGCGCTGGAGCAGTTGCACCATGAGGACCGGCTCCAGGTGCACTGGGACATCGACCCCGCCACCGAGGGCGCGACCCTTCCGCCGATGCTGCTGCAACTGCTGGTGGAAAACGCCATCAAGCACGGCATCGCCCGCACGGCTGGCGGCGGCGCGCTGGGCATCGTGCTGAAGCGGCAGGGGGCGCAATTGACGATGGCGGTGAGCAATCCCGGCGTGTGGAACCCTGCGGCGCAGCATCCGCATGGCGTCGCAGCGGACGCGCTGCCCCCCTCCACCGGGCTGGGGCTGCCGCATCTGCGCGAGCGACTGCAGCGTGCCGGCGGGGCAGGCGCTGACTGCCGCATCGAAACCGGCGGGGGACAGGAATTGCGCACCCTGCTGGCGGAGGTGCCGGATGCCGACATCGTGGGCGAAGCCGCTGAGCTGGACGCCGCCCAGGATGGGATTGAGGCCCTGCGGCCCGACCTGATCCTGCTGGACGTGCACCTGCCGGGCGGCACGGGTTTCGATTTGCTGGATCGGCTGCGGCACGTCCCACTGGTCGTCTTCACCACGGCCTATGACCAGCATGCGCTGGCCGCATTCGAGCGCAATGCGCTGGACTACCTGCTCAAGCCGATCGACCCCGGCCGTCTGGAAGCGGCGCTCGACCGGGTGCGTGAGCGGCTCGCGTCGCAGCGCCTGCCTGCCGCGGCGGCGTCCGGGTCACCTGCGGGCAGCAAGGGCGCCGACGACATGGTGTTCCTGCGCGATGGCGAGCGCTGCTGGTCAGCGTCCGCTGCTTCAGCGCACCCTCAGTGCCCTGGAGGAGCGGCTGGACCCGCAGCTGTTCTTTCGGGCGAGCCGCAGTCACCTGATCAACCTGCGCTGGATCCAGGCGATCGAGCCCTGGCACAACGAGGGCTACCGGGTGACCCTGCGGGACGGACATCAGGTGGAAGTGTCTCGGCGTCAGGGCAAGCTGCTTCGGGATCAGCTGGAGCTGTGAACGGGGCCGTTTGTGGCGTCGCCGGCAGGCACTTGAAGGCGATTACCATCGCCGGTGCTTGCTTCACCGTTCAGCCGGTTCTGAGAGACCGCCGCTGA 1188 0.686 MLSRLSNTLRHTLQHSAKERVPLADELKVVRDYVALEQLHHEDRLQVHWDIDPATEGATLPPMLLQLLVENAIKHGIARTAGGGALGIVLKRQGAQLTMAVSNPGVWNPAAQHPHGVAADALPPSTGLGLPHLRERLQRAGGAGADCRIETGGGQELRTLLAEVPDADIVGEAAELDAAQDGIEALRPDLILLDVHLPGGTGFDLLDRLRHVPLVVFTTAYDQHALAAFERNALDYLLKPIDPGRLEAALDRVRERLASQRLPAAAASGSPAGSKGADDMVFLRDGERCWSASAASAHPQCPGGAAGPAAVLSGEPQSPDQPALDPGDRALAQRGLPGDPAGRTSGGSVSASGQAASGSAGAVNGAVCGVAGRHLKAITIAGACFTVQPVLRDRR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa1000157g0047 395 MobiDBLite consensus disorder prediction 295 356 - -
Bisa1000157g0047 395 SMART REC_2 147 250 IPR001789 GO:0000160
Bisa1000157g0047 395 SUPERFAMILY CheY-like 157 260 IPR011006 -
Bisa1000157g0047 395 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 21 142 IPR036890 -
Bisa1000157g0047 395 ProSiteProfiles Response regulatory domain profile. 143 254 IPR001789 GO:0000160
Bisa1000157g0047 395 Pfam Histidine kinase 1 45 IPR010559 GO:0000155|GO:0000160|GO:0016020
Bisa1000157g0047 395 Gene3D - 159 300 - -
Bisa1000157g0047 395 PANTHER SENSOR HISTIDINE KINASE YPDA 1 152 - -
Bisa1000157g0047 395 Pfam Response regulator receiver domain 157 250 IPR001789 GO:0000160
Bisa1000157g0047 395 Gene3D - 27 158 IPR036890 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa1000157g0047 182 256 Response Regulator Gene Family AT3G48100 32.955 3.90e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa1000157g0047 Response_reg 6.9e-14 CL0304